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ARTICLE

The DART classification of unannotated transcription within the ENCODE regions: Associating transcription with known and novel loci

  • Joel S. Rozowsky
  • Daniel Newburger
  • Fred Sayward
  • Jiaqian Wu
  • Greg Jordan
  • Jan O. Korbel Ugrappa Nagalakshmi Jin Yang Deyou Zheng Roderic Guigó Thomas R. Gingeras
  • ... [+6 authors] ...,
  • Sherman Weissman
  • Perry Miller
  • Michael Snyder
  • Mark B. Gerstein
  • First Published June 13, 2007
ARTICLE

Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions

  • France Denoeud
  • Philipp Kapranov
  • Catherine Ucla
  • Adam Frankish
  • Robert Castelo
  • Jorg Drenkow Julien Lagarde Tyler Alioto Caroline Manzano Jacqueline Chrast Sujit Dike Carine Wyss Charlotte N. Henrichsen Nancy Holroyd Mark C. Dickson Ruth Taylor Zahra Hance Sylvain Foissac Richard M. Myers Jane Rogers Tim Hubbard Jennifer Harrow
  • ... [+17 authors] ...,
  • Roderic Guigó
  • Thomas R. Gingeras
  • Stylianos E. Antonarakis
  • Alexandre Reymond
  • First Published June 13, 2007
ARTICLE

Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia

  • Piero Carninci
  • Kazunori Waki
  • Toshiyuki Shiraki
  • Hideaki Konno
  • Kazuhiro Shibata
  • Masayoshi Itoh Katsunori Aizawa Takahiro Arakawa Yoshiyuki Ishii Daisuke Sasaki Hidemasa Bono Shinji Kondo Yuichi Sugahara Rintaro Saito Naoki Osato Shiro Fukuda Kenjiro Sato Akira Watahiki Tomoko Hirozane-Kishikawa Mari Nakamura Yuko Shibata Ayako Yasunishi Noriko Kikuchi Atsushi Yoshiki Moriaki Kusakabe Stefano Gustincich Kirk Beisel William Pavan Vassilis Aidinis Akira Nakagawara William A. Held Hiroo Iwata Tomohiro Kono Hiromitsu Nakauchi Paul Lyons Christine Wells David A. Hume Michela Fagiolini Takao K. Hensch Michelle Brinkmeier Sally Camper Junji Hirota Peter Mombaerts
  • ... [+38 authors] ...,
  • Masami Muramatsu
  • Yasushi Okazaki
  • Jun Kawai
  • Yoshihide Hayashizaki
  • First Published June 2, 2003
ARTICLE

Impact of Alternative Initiation, Splicing, and Termination on the Diversity of the mRNA Transcripts Encoded by the Mouse Transcriptome

  • Mihaela Zavolan
  • Shinji Kondo
  • Christian Schönbach
  • Jun Adachi
  • David A. Hume
  • Yoshihide Hayashizaki
  • Terry Gaasterland
  • First Published June 2, 2003
ARTICLE

Identification of Putative Noncoding RNAs Among the RIKEN Mouse Full-Length cDNA Collection

  • Koji Numata
  • Akio Kanai
  • Rintaro Saito
  • Shinji Kondo
  • Jun Adachi
  • Laurens G. Wilming
  • David A. Hume
  • Yoshihide Hayashizaki
  • Masaru Tomita
  • First Published June 2, 2003
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