Searching journal content for articles similar to Makanae et al. 23 (2): 300.

Displaying results 1-10 of 5109

For checked items

view abstracts
download to citation manager

Select this article
Research: Natural diversity of telomere length distributions across 100 Saccharomyces cerevisiae strains
- Clotilde Garrido,
- Cintia Gómez-Muñoz,
- Etienne Kornobis,
- Nicolas Agier,
- Oana Ilioaia,
- Gilles Fischer,
- and Zhou Xu
Genome Res. March 2026 36: 522-533; Published in Advance January 16, 2026, doi:10.1101/gr.281132.125
...a method for detecting telomeric sequences in Saccharomyces cerevisiae s from raw Oxford Nanopore Technologies (ONT) sequencing reads, providing a comprehensive view of TL distributions both -wide and at individual chromosome extremities. We analyze the TL distribution in 100 S. cerevisiae strains...
Select this article
Resource: Chromosome-level subgenome-aware de novo assembly provides insight into Saccharomyces bayanus genome divergence after hybridization
- Cory Gardner,
- Junhao Chen,
- Christina Hadfield,
- Zhaolian Lu,
- David Debruin,
- Yu Zhan,
- Maureen J. Donlin,
- Tae-Hyuk Ahn,
- and Zhenguo Lin
Genome Res. November 2024 34: 2133-2146; Published in Advance September 17, 2024, doi:10.1101/gr.279364.124
...the introgression of Saccharomyces cerevisiae, such as those involved in the maltose metabolism. Finally, the patterns of recombination and LOH suggest an allotetraploid origin of S. bayanus. The gene acquisition and rapid LOH in the hybrid probably facilitated its adaptation to maltose brewing environments...
Select this article
Research: Extensive sampling of Saccharomyces cerevisiae in Taiwan reveals ecology and evolution of predomesticated lineages
- Tracy Jiaye Lee,
- Yu-Ching Liu,
- Wei-An Liu,
- Yu-Fei Lin,
- Hsin-Han Lee,
- Huei-Mien Ke,
- Jen-Pan Huang,
- Mei-Yeh Jade Lu,
- Chia-Lun Hsieh,
- Kuo-Fang Chung,
- Gianni Liti,
- and Isheng Jason Tsai
Genome Res. May 2022 32: 864-877; Published in Advance March 31, 2022, doi:10.1101/gr.276286.121
...yeast Saccharomyces cerevisiae before human domestication remain poorly understood. Taiwan is regarded as part of this yeast's geographic birthplace, where the most divergent natural lineage was discovered. Here, we extensively sampled the broadleaf forests across this continental island to probe...
OPEN ACCESS ARTICLE
Select this article
Method: Absolute nucleosome occupancy map for the Saccharomyces cerevisiae genome
- Elisa Oberbeckmann,
- Michael Wolff,
- Nils Krietenstein,
- Mark Heron,
- Jessica L. Ellins,
- Andrea Schmid,
- Stefan Krebs,
- Helmut Blum,
- Ulrich Gerland,
- and Philipp Korber
Genome Res. December 2019 29: 1996-2009; Published in Advance November 6, 2019, doi:10.1101/gr.253419.119
...Absolute nucleosome occupancy map for the Saccharomyces cerevisiae Elisa Oberbeckmann1,8, Michael Wolff2,8, Nils Krietenstein1,3, Mark Heron4,5, Jessica L. Ellins6, Andrea Schmid1, Stefan Krebs7, Helmut Blum7, Ulrich Gerland2 and Philipp Korber1 1Molecular Biology Division, Biomedical Center...
Select this article
Resource: Pervasive and dynamic transcription initiation in Saccharomyces cerevisiae
- Zhaolian Lu and
- Zhenguo Lin
Genome Res. July 2019 29: 1198-1210; Published in Advance May 10, 2019, doi:10.1101/gr.245456.118
...in response to various environmental stimuli in a classic model organism Saccharomyces cerevisiae has not been systematically investigated. In this study, we generated quantitative maps of transcription start sites (TSSs) at a single-nucleotide resolution for S. cerevisiae grown in nine different conditions...
Select this article
Resource: Global analysis of protein homomerization in Saccharomyces cerevisiae
- Yeonsoo Kim,
- Jong Pil Jung,
- Chan-Gi Pack,
- and Won-Ki Huh
Genome Res. January 2019 29: 135-145; Published in Advance December 19, 2018, doi:10.1101/gr.231860.117
...in lipid metabolism. Eur J Biochem 266: 1–16. doi:10.1046/j.1432-1327.1999.00822.x ↵Athenstaedt K, Zweytick D, Jandrositz A, Kohlwein SD, Daum G. 1999. Identification and characterization of major lipid particle proteins of the yeast Saccharomyces cerevisiae. J Bacteriol 181: 6441–6448. ↵Babu M, Vlasblom J...
Select this article
Research: RNA–DNA sequence differences in Saccharomyces cerevisiae
- Isabel X. Wang,
- Christopher Grunseich,
- Youree G. Chung,
- Hojoong Kwak,
- Girish Ramrattan,
- Zhengwei Zhu,
- and Vivian G. Cheung
Genome Res. November 2016 26: 1544-1554; Published in Advance September 16, 2016, doi:10.1101/gr.207878.116
...RNA–DNA sequence differences in Saccharomyces cerevisiae Isabel X. Wang 1 , Christopher Grunseich 2 , Youree G. Chung 3 , Hojoong Kwak 1 , 4 , Girish Ramrattan 1 , 4 , Zhengwei Zhu 1 and Vivian G. Cheung 1 , 4 , 5...
OPEN ACCESS ARTICLE
Select this article
Method: Efficient taxa identification using a pangenome index
- Omar Ahmed,
- Massimiliano Rossi,
- Christina Boucher,
- and Ben Langmead
Genome Res. July 2023 33: 1069-1077; Published in Advance May 31, 2023, doi:10.1101/gr.277642.123
...mock community consisting of eight species (Staphylococcus aureus, S. enterica, E. coli, Pseudomonas aeruginosa, Listeria monocytogenes, Enterococcus faecalis, Bacillus subtilis, and Saccharomyces cerevisiae). We extracted a set of 582,042 reads from the data set that uniquely mapped to one...
OPEN ACCESS ARTICLE
Select this article
Research: Fitness benefits of loss of heterozygosity in Saccharomyces hybrids
- Samuel M. Lancaster,
- Celia Payen,
- Caiti Smukowski Heil,
- and Maitreya J. Dunham
Genome Res. October 2019 29: 1685-1692; Published in Advance September 23, 2019, doi:10.1101/gr.245605.118
..., 2018).Specific haploproficient loci rarely overlap between S. cerevisiae diploids and interspecific hybrids, indicating that simple gene dosage changes are unlikely to explain their adaptive benefit and/or that dosage sensitivity is strongly dependent on species context. Furthermore, the specific loci...
Select this article
Research: Unique genetic basis of the distinct antibiotic potency of high acetic acid production in the probiotic yeast Saccharomyces cerevisiae var. boulardii
- Benjamin Offei,
- Paul Vandecruys,
- Stijn De Graeve,
- María R. Foulquié-Moreno,
- and Johan M. Thevelein
Genome Res. September 2019 29: 1478-1494; Published in Advance August 29, 2019, doi:10.1101/gr.243147.118
...obscure. It is considered conspecific with budding yeast Saccharomyces cerevisiae, which is generally used in classical food applications. They have an almost identical sequence, making the genetic basis of probiotic potency in S. boulardii puzzling. We now show that S. boulardii produces at 37°C...
OPEN ACCESS ARTICLE

For checked items

view abstracts
download to citation manager

Searching journal content for articles similar to Makanae et al. 23 (2): 300.

Search Results

Modify Results

This search

Preprint Server

Current Issue

In This Issue

Citation format:
Results / page:
Results order: