A Gene Map of the Best’s Vitelliform Macular Dystrophy Region in Chromosome 11q12–q13.1

Table 2 Retrieved cDNAs with Sequence Identity to Known Genes

 

 

 

Contig

No. of clones identified

Clone(s) analyzed

Sizea

(bp)

GenBank Acc. No.

Similarity regions

Repeats

Northern Blot Analysis

Transcription unit

C96-1

C96-2

C96-3

6

1

1

IG9/IIIF1/

IIIF5/IIIH12

IIIC2

IH10

783

575

431

-

-

-

DDB1 Accession No. U18299

C96-1 bp 362-464 = U18299

bp 1223-1325 (cds)

C96-2 = U18299 bp 2920-2395 (cds)

C96-3 = U18299 bp 3762-4193 (3'UTR)

-

-

(CA)n

-

+

-

TU1

C97A-6

3

IVE6

594

-

FEN-1 Accession No. S70527

C97A-6 = S70527 bp 1646-2240 (3'UTR)

-

+

TU11

C97B-1

11

IXD11

439

-

FTH1 Accession No. M11146

C97B-1 = M11146 bp 790-366 (cds, 3' UTR)

-

+

TU14

 

aThe sizes given in basepairs correspond to individual clones or were compiled from overlapping sequences of different clones as indicated.

This Article

  1. doi: 10.1101/gr.8.1.48 Genome Res. January 1, 1998 vol. 8 no. 1 48-56

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