A Linkage Map of the Rat Genome Derived from Three F2 Crosses
Table 1
Polymorphism rates (%) for SSPL markers among
28 inbred strains of rat
| WKY HEID | WKY GLAS | WKY RAPP | WKY LEIC | WKY IZM | WKY NIH | BN PARIS | BN RAPP | BN RI | LEW PARIS | LEW RAPP | FISH | MNS RAPP | MNS MILAN | LN LYON | SR/JR RAPP | SHRSP HEID | SHRSP GLAS | SHRSP IZM | SHR HEID | SHR LEIC | SHR RI |
SS/JR RAPP | MHS MILAN | LH LYON | GK | PKD | WKHA | |
| WKY HEID | 39.5 | 33.1 | 32.5 | 32.4 | 35.2 | 85.5 | 85.4 | 85.9 | 66.1 | 65.0 | 71.8 | 70.5 | 72.4 | 66.8 | 67.9 | 46.1 | 47.3 | 51.7 | 43.8 | 44.5 | 46.2 | 68.1 | 68.1 | 68.6 | 57.7 | 67.8 | 35.8 | |
| WKY GLAS | 29.5 | 31.1 | 39.7 | 30.0 | 89.8 | 90.2 | 93.6 | 70.9 | 70.4 | 71.4 | 72.1 | 71.9 | 70.2 | 74.0 | 35.7 | 32.4 | 35.0 | 28.9 | 25.3 | 28.2 | 75.1 | 69.6 | 71.2 | 61.9 | 71.3 | 33.2 | ||
| WKY RAPP | 13.9 | 29.8 | 13.5 | 85.7 | 85.7 | 86.9 | 68.2 | 69.3 | 74.3 | 71.4 | 72.4 | 68.6 | 71.8 | 49.7 | 45.7 | 49.0 | 48.0 | 47.2 | 47.6 | 72.4 | 70.7 | 72.0 | 58.9 | 68.5 | 18.6 | |||
| WKY LEIC | 27.8 | 20.2 | 86.0 | 84.8 | 86.8 | 68.4 | 68.8 | 73.5 | 72.4 | 72.4 | 68.7 | 71.7 | 50.3 | 47.8 | 50.3 | 48.8 | 45.6 | 50.5 | 72.1 | 68.4 | 71.0 | 58.9 | 67.7 | 21.7 | ||||
| WKY IZM | 31.0 | 85.8 | 87.1 | 87.5 | 66.9 | 66.3 | 71.9 | 68.6 | 69.8 | 68.7 | 71.8 | 52.3 | 52.2 | 50.3 | 46.9 | 45.6 | 46.9 | 72.0 | 65.2 | 69.9 | 56.4 | 66.6 | 32.1 | |||||
| WKY NIH | 88.5 | 88.4 | 88.9 | 68.2 | 70.0 | 73.7 | 70.7 | 70.7 | 68.6 | 71.7 | 46.9 | 44.5 | 46.7 | 44.5 | 44.8 | 44.5 | 73.9 | 70.1 | 71.9 | 58.4 | 67.5 | 19.4 | ||||||
| BN PARIS | 10.1 | 13.0 | 68.5 | 69.5 | 77.9 | 75.8 | 76.8 | 79.0 | 75.6 | 90.6 | 90.6 | 90.3 | 92.1 | 90.4 | 94.1 | 74.6 | 76.5 | 75.6 | 82.1 | 76.6 | 87.0 | |||||||
| BN RAPP | 13.8 | 69.2 | 71.1 | 79.6 | 78.1 | 77.6 | 76.6 | 76.5 | 89.9 | 90.8 | 92.5 | 93.3 | 90.6 | 96.0 | 75.1 | 77.7 | 75.2 | 81.9 | 76.4 | 86.4 | ||||||||
| BN RI |
69.6 | 69.2 | 78.7 | 76.8 | 77.1 | 77.9 | 78.2 | 93.9 | 94.2 | 92.4 | 96.0 | 94.5 | 95.8 | 76.9 | 77.2 | 76.1 | 82.0 | 77.6 | 87.9 | |||||||||
| LEW PARIS | 13.7 | 58.2 | 48.7 | 48.1 | 51.0 | 53.3 | 69.9 | 70.4 | 70.4 | 72.0 | 71.4 | 72.4 | 53.5 | 45.1 | 51.9 | 61.2 | 52.2 | 67.7 | ||||||||||
| LEW RAPP | 55.0 | 53.4 | 51.9 | 56.1 | 56.2 | 71.2 | 70.4 | 69.7 | 73.8 | 71.6 | 72.0 | 57.0 | 48.0 | 56.6 | 64.2 | 56.1 | 69.1 | |||||||||||
| FISH |
62.0 | 58.8 | 51.0 | 56.7 | 70.6 | 69.9 | 71.7 | 70.6 | 70.7 | 70.1 | 56.7 | 58.1 | 52.7 | 69.5 | 56.9 | 71.6 | ||||||||||||
| MNS RAPP | 10.1 | 55.9 | 56.3 | 71.5 | 72.0 | 71.0 | 73.4 | 72.2 | 69.8 | 54.0 | 44.7 | 54.6 | 64.8 | 56.7 | 69.8 | |||||||||||||
| MNS MILAN | 55.4 | 57.5 | 73.0 | 74.1 | 72.8 | 73.7 | 72.2 | 71.5 | 55.6 | 39.8 | 54.4 | 66.0 | 56.1 | 70.3 | ||||||||||||||
| LN LYON | 30.7 | 67.1 | 68.3 | 69.7 | 71.1 | 69.3 | 71.7 | 30.0 | 55.7 | 22.6 | 66.4 | 35.6 | 66.6 | |||||||||||||||
| SR/JR RAPP | 70.5 | 70.4 | 73.3 | 74.3 | 73.2 | 74.2 | 32.7 | 56.7 | 32.9 | 63.1 | 38.3 | 67.3 | ||||||||||||||||
| SHRSP HEID | 13.2 | 17.6 | 22.6 | 23.8 | 23.6 | 71.7 | 70.9 | 70.8 | 59.9 | 68.7 | 43.4 | |||||||||||||||||
| SHRSP GLAS | 15.0 | 25.3 | 20.3 | 21.7 | 72.4 | 70.4 | 71.7 | 58.9 | 69.1 | 39.9 | ||||||||||||||||||
| SHRSP IZM | 26.9 | 22.0 | 20.8 | 74.1 | 70.4 | 75.0 | 59.8 | 71.2 | 43.3 | |||||||||||||||||||
| SHR HEID | 12.5 | 11.5 | 75.5 | 72.2 | 73.6 | 60.7 | 72.0 | 40.8 | ||||||||||||||||||||
| SHR LEIC | 9.9 | 74.0 | 70.4 | 71.5 | 56.8 | 69.4 | 40.3 | |||||||||||||||||||||
| SHR RI |
74.2 | 71.2 | 75.0 | 60.3 | 70.6 | 40.5 | ||||||||||||||||||||||
| SS/JR RAPP | 54.9 | 29.7 | 66.9 | 39.2 | 70.5 | |||||||||||||||||||||||
| MHS MILAN | 56.6 | 67.8 | 54.3 | 67.2 | ||||||||||||||||||||||||
| LH LYON | 68.7 | 35.9 | 70.0 | |||||||||||||||||||||||||
| GK |
62.8 | 60.0 | ||||||||||||||||||||||||||
| PKD |
68.0 | |||||||||||||||||||||||||||
| WKHA |
Strain designations are: WKY, Wistar Kyoto from Heidelberg-Germany (HEID), Glasgow-UK (GLAS), Leicester-UK (LEIC), Izumo-Japan (IZM), NIH-U.S.A. and John Rapp (RAPP) colonies; BN, Brown Norway from Paris-France (PARIS), RAPP and the recombinant inbred strain (RI); LEW, Lewis from French and North American colonies (PARIS and (RAPP) and from the origional colony in Milano-Italy (MILAN); LNM, Normotensive rat from Lyon-France; SR/JR John Rapp salt-resistant rat; SHRSP, Stroke Prone Spontaneously Hypertensive rat (HEID, GLAS, IZM); SHR Spontaneously Hypertensive HEID and LEIC colonies and the recombinant inbred strain (RI); SS/JR John Rapp salt-sensitive rat; MHS Milan Hylertensive rat (MILAN); LH, Lyon hypertensive rat; GK, Goto Kakisaki diabetic (type2) strain; PDK, polycystic kidney disease rat strain; WKHA, Wistar Kyoto hyperactive rat.
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This Article
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doi: 10.1101/gr.7.5.434 Genome Res. May 1, 1997 vol. 7 no. 5 434-440
