Extensive Conservation of Sex Chromosome Organization Between Cat and Human Revealed by Parallel Radiation Hybrid Mapping

Table 1.

Oligonucleotides Used in this Study

Locus First-round primers (5′ to 3′) Second-round primers (5′ to 3′)
Feline
AMELX F-CTACCACCTCATCCTGGGCA F-TTCCCATTACCAGCTTCCTG
R-TTGGTGGTGCAGCCATCCAC R-CCCCAACTTTTACAGGCTGA
ARAF1 F-GGACCTCAGCAAAATCTCCA R-GCCTAATGGGGAAGTACATC
R-GCTCAATCTTGGGGAGTGAC
ATP7A(mnk) Venta et al. (1996) F-CTCTCAAGGTCTCTGGAGAA
BGN Lyons et al. (1997) F-CAGGAAAGGCTCAGGGAGAG
BTK Lyons et al. (1997) F-AACACAAATCCTGTCTCCATCA
R-TTCAGTCAGCAGTGGAGCTG
DBX F-TATTTTGGGGTAGTGTGAGC F-CAGATTCTCAGATGTTTGTTGC
R-GGCCACGCGTCGACTAGTAC R-ACATGTTTGAGGATAGCAATGT
DFFRX F-GACTGCAGTAACTCAGAGGA F-CTGTTAATTCTTAAGCAAGAAAC
R-GGCCACGCGTCGACTAGTAC R-TTGCAGAGTGCAATGGGTAG
DMD F-AAGTGGAAATGTTGCCAAGG R-CACACACACACACACGCATT
R-AGGTGGTGACATAAGCAGCC
F9 Lyons et al. (1997)
IDS F-ACATTGACCAACTGGCATCC
R-CACCGACATGGTCACATAGC
MAOA F-GGCACTACTCGGATATTCTC
R-ACTTGACCAGATCCACCTAC
PHKA2 F-GTGGGAGCGTGGAGATAAGA F-GTGGCAACATCCAGGAAAGT
R-TGAATCACTGACTTGCGTCC R-ACAAGCACAGGTGTGAATCAG
PLP F-GGCCACTGGATTGTGTTTCT
R-TAGTCGCCAAAGATCTGCCT
RPS4X F-TGATGGCAAGGTCCGAACTG
R-TGGTGTCATAGATCAGGCGG
SMCX F-TCAGGGGCTGAAGAAGAAGA F-CCCCCACACTAGATGCAGAT
R-TGGACCCACAGTGACTGGTA R-TCTCTTCCCAGACCTCTCCA
UBE1X Murphy et al. (1999) F-GCACGGGGATCTCAGAAGA
R-AATGCCACAGGTAAAGGAGA
UTX F-CACCCTCTTCAGCCATTTC F-GACGAATCCTAGCAACCAGC
R-GTTGGTGGTCTTGGAGGTG R-CCTGAGTGTCATGGGGAAAC
XIST F-TGTTCCAGGCCAATGAGAAG R-CACTCTGTCCCAGGACCAAT
R-TTGGCCACTACTATGAGCAG
ZFX Pecon-Slattery and O'Brien (1998)
FCA018 Menotti-Raymond et al. (1999)
FCA240 Menotti-Raymond et al. (1999)
FCA311 Menotti-Raymond et al. (1999)
FCA478 Menotti-Raymond et al. (1999)
FCA651 Menotti-Raymond et al. (1999)
FCA674 Menotti-Raymond et al. (1999)
AMELY same as AMELX (above) F-CCCAGCACACTCCTATTTGG
R-GGAATTTCAGCTGCAAAGGA
DFFRY same as DFFRX (above) F-GCAGAATGCAGCAGACGTAA
R-CACCTGCAGGGGAAAGTGTA
DBY same as DBX (above) F-TGAAGAAACACTTCCAAACATTG
R-ACTGAAAATGTTGCTGGATGAA
SMCY Murphy et al. (1999)
SRY Lyons et al. (1997)
UBE1Y Murphy et al. (1999) F-ACCTTGGGGCAAATCATGTA
R-CCAAGCACTCCCTTTGTGAT
UTY same as UTX (above) F-CCTCTACACTTGCAGGAAGAA
R-GGGGAAAAGTTACTGACATGGA
ZFY Pecon-Slattery and O'Brien (1998)
Human
AMELX Chen et al. (1999)
DBX GenBank accession no. G33988
DFFRX RH database no. 47975
PLP GenBank accession no. M54927
SMCX F-CCACTCTCCTCCCCTCTTTT
R-CTGAGGTGGTTGTGAGGACA
UTX F-AACCAACTGGACGGAGAG
R-TTCTGAAGGGGGAAAAGACA
ZFX Chen et al. (1999)
  • Used in conjunction with first-round primer of opposite orientation.

  • Nomenclature used in Venta et al. (1996).

  • Abridged Universal Amplification Primer (GIBCO, BRL).

This Article

  1. Genome Res. 9: 1223-1230

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