A Multilocus Genotyping Assay for Candidate Markers of Cardiovascular Disease Risk

Table 3.

Pairs of Variant Alleles Observed to Have Suggestively Significant Association with the Severity of Atherosclerosis as Represented by Gensini Scores

Marker I (background) Marker 2 (additional variant) Q1 vs Q5
combined gender females only
apoE (3/4, 4/4) CBS278thr/68-bp I *
apoCIII (−625)del orapoCIII (−455)C apoBIle-71 *
apoCIII3206G apoB Ile-71 *
PON192arg apoBIle-71 *
PON 192arg ACE(I/D, D/D) *
ACE (I/D, D/D) apoB Ile-71 **
ATIIR1166C AGT Thr-235 *
ATIIR1166C CBS Thr278/68-bp I *
AGT 235thr apoBIle-71 **
AGT 235thr ATIIR1166C *
CBS 278thr/68-bp I apoCIII (−625)del or apoCIII(−455)C *
CBS 278thr/68-bp I apoCIII (−428T)C *
GPIIIa33pro ATIIR 1166C * *
fibrinogen(−455)A apoB Ile-71 *
          ▴ Predisposing: 3 5
          ▾ Protective: 0 7
  • For each pair listed, the odds ratio corresponds to the risk associated with carrying a second variant allele (relative to the more frequent allele of Marker 2) within the set of individuals who carried a first variant allele (the background marker). A total of 15 markers were analyzed in this pairwise manner. Both combined-gender and female-only quintiles were evaluated, as described in Methods. (**)P < 0.01; (*) 0.001 ≤ P < 0.05; (—) P > 0.05.

This Article

  1. Genome Res. 9: 936-949

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