A Gene Map of the Best’s Vitelliform Macular Dystrophy Region in Chromosome 11q12–q13.1

Table 1.

Expression Analysis of TUs

TU Size (kb) Tissue specificity Representation in tissue-specific cDNA libraries
TU1 (DDB1) 4.2 all tissues tested, with higher expression in retina placenta, fetal heart, fetal liver/spleen, fibroblast, fetal lung, blood peripheral lymphocytes, ovary, breast, brain
TU2 2.8 lung, ARPE-19 melanocyte, fetal heart, infant brain, pregnant uterus, HeLa, placenta, uterus tumor, total fetus, endothelial cell, ovary tumor
TU3 1.3 all tissues tested, with higher expression in retina e.g., melanocyte, placenta, breast, fetal heart, pregnant uterus, fetal liver/spleen, retina, fetal heart, fetal cochlea, fetal lung
TU4 1.1 all tissues tested fetal liver/spleen, fetal heart, infant and adult brain, melanocyte, thyroid, fetal lung, embryo
TU5 4.0 all tissues tested, with higher expression in lung , infant brain
TU6 1.9 all tissues tested fetal liver/spleen
TU7 1.4 all tissues tested placenta, fetal liver/spleen, brain, melanocyte, multiple sclerosis lesions, fetal heart
TU8 7.5 brain infant brain
7.0 brain, liver, pancreas, placeta
5.5 placenta
TU9 7.5 placenta, skeletal muscle, kidney , retina
TU10 5.7 lung, ARPE-19, with higher expression in ARPE-19 infant and adult brain, multiple sclerosis lesions, colon carcinoma, ovary tumor, cerebellum, hippocampus
TU11 (FEN1) 2.3 all tissues tested infant brain, fetal liver/spleen, placenta, heart
TU12 4.0 all tissues tested, with higher expression in ARPE-19 brain, fetal heart, fetal liver/spleen, neuroepithelium, melanocyte
TU13 4.0 lung, cerebellum, retina fetal/liver spleen, infant brain
3.1  cerebellum, retina, ARPE-19
TU14 (FTH1) 1.1 all tissues tested lung, HeLa, fetal heart, placenta, fetal liver/spleen, fetal lung, endothelial, fetal spleen, pancreatic islets, brain
TU15 3.5 lung, ARPE-19 fetal liver/spleen, pancreas tumor, retina
TU16 1.1 all tissues tested fetal liver/spleen, colon, B cell, skeletal muscle, lung
TU17 1.6 all tissues tested
  • Data have been obtained from BLAST searches against dbEST and/or from the UniGene server at http:/www.ncbi.nlm.gov/UniGene/index.html

  • Lung, cerebellum, retina, ARPE-19 (total RNA blot).

  • Heart, brain, placenta, lung, liver, skeletal muscle, kidney, pancreas [poly(A)+ RNA blot, Clontech].

This Article

  1. Genome Res. 8: 48-56

Preprint Server