Comparative Sequence Analysis of a Gene-Rich Cluster at Human Chromosome 12p13 and its Syntenic Region in Mouse Chromosome 6

Table 1.

Nucleotide and Amino Acid Sequence Comparison Between the Coding Segments of the Genes

Gene Amino acid similarity (%) Amino acid identity (%) Nucleotide similarity (% coding cDNA)
CD4 62.9 56.3 70.2
A-2 96.8 95.9 89.5
B 90.9 87.6 86.4
GNB3 98.2 97.0 89.8
C8 75.9 73.3 81.5
ISOT-1 98.6 98.4 91.9
TPI 96.0 96.0 88.7
C9 92.0 90.9 87.4
B7 86.6 79.7 81.6
ENO-2 99.1 98.6 91.7
DRPLA 95.1 94.3 88.9
C10 97.6 97.6 88.7
PTPN6 (hem) 96.1 94.4 89.2
BAP 100 100 91.3
C2f 92.2 88.9 85.0
C3f 93.2 89.8 88.6
  • For B7, the new identified exon was included. Sequence comparison was performed using the GCC BestFit program.

This Article

  1. Genome Res. 8: 29-40

Preprint Server