Figure 4.
Statistical analysis of centromere alignment results between CHM13 and CHM1 using RaMA. (A) Proportion of two types of reliable regions, based on identity and rare matches, across different chromosomes relative to the reference sequence length. (B) Comparison of the single-nucleotide variant (SNV) rates between the entire reference sequence region and identity-based reliable regions. (C) The proportion of total long indel length and the total length of reliable long indels based on rare matches in the full alignment length.
