Fast sequence alignment for centromeres with RaMA

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Figure 2.
Figure 2.

Comparison of alignment paths between RaMA and other methods on real and simulated centromere sequences. Series A uses a template with region 1 removed as the reference and a template with region 2 removed as the query. Series B shows the X Chromosome centromere of CHM13 as the reference and HG002 as the query. Labels 1, 2, and 3 correspond to RaMA compared with minimap2, wfmash, and UniAligner, respectively.

This Article

  1. Genome Res. 35: 1209-1218

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