RAmbler resolves complex repeats in human Chromosomes 8, 19, and X

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Figure 3.
Figure 3.

Relationship among RAmbler's performance, mutation rate P, and number of true unikmers. (A) Performance of RAmbler for several choices of the mutation rate P over 27 different combinations of repetitive regions with repeat sizes {10, 15, 20} kb, number of copies {2, 5, 10}, coverage depth = {20×,30×,40×}. (B) Number of true unikmers as a function of mutation rate and repeat unit's sizes (five copies).

This Article

  1. Published in Advance March 4, 2025, doi: 10.1101/gr.279308.124 Genome Res. 35: 863-876

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