Motif characterization with different methods. (A) The motif characterization of the RFC1 repeats in HG002 and a CANVAS patient. The results from (A1) MotifScope, (A2) uTR, (A3) TRF, (A4) vamos original, (A5) vamos efficient of the RFC1 repeat in the HG002 assembly and the assembly of a Dutch CANVAS patient, and (A6) zoomed-in view of the circled region of one patient allele are visualized. In each subfigure, the left panel shows the clustering of the sequences, the right panel shows the composition of the repeat, with distinct motifs represented in different colors, as indicated by the color bar on the right side of the figure. (B) The motif characterization of forensic loci D2S441 in HG002. This shows the visualization of the decomposing result from MotifScope, TRF, uTR, vamos efficient, and vamos original of the assembly of the forensic D2S441 locus in HG002 genome assembly, with distinct motifs represented in different colors, as indicated by the color bar on the right side of the figure.
