Probing the eukaryotic microbes of ruminants with a deep-learning classifier and comprehensive protein databases

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 5.
Figure 5.

Diverse ruminant gut eukaryotic proteins identified in the databases. (A) The number of protein clusters identified in foregut protozoal, foregut fungal, and hindgut eukaryotic protein databases. (B) The most prevalent foregut protozoal glycoside hydrolases (GHs) identified. (C) The most prevalent foregut protozoal secretory (with identified signal peptides) peptidases and peptidase inhibitors identified. (D) The number of unique foregut protozoal secretory peptidases or peptidase inhibitors identified based on catalytic sites.

This Article

  1. Genome Res. 35: 368-378

Preprint Server