Table 1.
Summary of strains, ChIP-seq data sets, and stages for worm and fly TFs
| TF set | Worm | Fly | ||
|---|---|---|---|---|
| Total TFs | 833 | 659 | ||
| TFs set asidea | 193 | 0 | ||
| TFs_targeted | 640 | 659 | ||
| TFs_strainsb | 514 | 616 | ||
| TFs_ChIP'ed | 356 | 605 | ||
| Stage | # | Stage | # | |
| Embryo | 125 | Embryo | 528 | |
| L1 | 94 | Larvad | 42 | |
| L2 | 47c | Prepupa | 59 | |
| L3 | 46 | Pupa | 20 | |
| L4 | 105 | Adult | 22 | |
| Young adult | 108 | Unknown | 7 | |
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aIn the worm some rapidly evolving nhr genes were not targeted.
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bIn the worm 110 TFs with strains were not ChIP'ed because expression was cytoplasmic, expression was insufficient to ChIP, the strain had a phenotype or the gene was a rapidly evolving nhr.
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cOne experiment was done with dauers.
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dWandering third instar.
