Table 1.
Assembly statistics for the S. bayanus genome and subgenome grouping
| Total genome excluding mtDNA | Subgenome grouping | Mitochondrial DNA | ||
|---|---|---|---|---|
| Haplotype-a | Haplotype-b | |||
| Assembly | ||||
| Genome size (bp) | 23,484,151 | 11,829,624 | 11,654,527 | 64,655 |
| No. of sequences | 32 | 16 | 16 | 1 |
| Largest (bp) | 1,292,201 | 1,292,201 | 1,163,801 | 64,655 |
| Smallest (bp) | 208,383 | 217,795 | 208,383 | 64,655 |
| Mean (bp) | 733,879 | 739,352 | 728,408 | 64,655 |
| N50 (bp) | 912,922 | 912,922 | 919,249 | 64,655 |
| GC (%) | 40.1 | 40.1 | 40.1 | 16.23 |
| N count | 300 | 100 | 200 | 0 |
| Annotation | ||||
| Genes | 11,545 | 5737 | 5808 | 20 |
| CDS | 12,789 | 6318 | 6471 | 8 |
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The table details the genomic assembly metrics for the S. bayanus species, including the total genome and two subgenomes, haplotype-a and haplotype-b, along with the mitochondrial genome. As ancestral subgenomes cannot be directly inferred, homologous chromosomes have been categorized into two hypothetical subgenomes to facilitate analysis.
