Table 4.
Read partitioning statistics
| Sample | Haplotype-partitioned reads | Homozygous reads | Unknown reads |
|---|---|---|---|
| PGF + COX | 150,713 (85.15%) | 25,042 (14.15%) | 1235 (0.7%) |
| EAS-P | 199,652 (79.49%) | 48,423 (19.28%) | 3092 (1.23%) |
| EUR-P | 259,482 (51.98%) | 236,086 (47.29%) | 3628 (0.73%) |
| AFA | 172,561 (77.65%) | 42,875 (19.29%) | 6789 (3.06%) |
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Number of edited reads that are either in haplotype-specific regions that could be partitioned (haplotype partitioned reads), homozygous regions of the MHC (homozygous reads), or haplotype-specific regions that could not be partitioned (unknown reads). Percentages relative to the total edited reads (Table 2) are in parentheses.
