Gene essentiality in cancer cell lines is modified by the sex chromosomes

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Figure 6.
Figure 6.

Genes with sex-biased somatic mutations in cancer tumors. (A) X-linked genes show sex bias in rates of somatic mutations. Values are the −log10 of the P-values for differences in mutation rates between males and females as a function of the positions of the genes on the X Chromosome. Genes that escape from XCI are highlighted. (BD) GSEA plots. The vertical black lines indicate the position of genes in the sets relative to all X-linked genes that are ranked from the most significant male-biased genes to the most significant female-biased genes. The green curve is the enrichment score based on a weighted running sum. (B) GSEA plot for Y-linked paralogs. (C) GSEA plot for XCI escape genes. (D) GSEA plot for genes expressed predominantly in the testis, based on data from the Human Protein Atlas.

This Article

  1. Genome Res. 32: 1993-2002

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