Index by Author

October 2018; 28 (10)
  1. A
  2. B
  3. C
  4. D
  5. E
  6. F
  7. G
  8. H
  9. I
  10. J
  11. K
  12. L
  13. M
  14. N
  15. O
  16. P
  17. Q
  18. R
  19. S
  20. T
  21. U
  22. V
  23. W
  24. X
  25. Y
  26. Z

A

  1. Abnave, Prasad

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

  2. Aboobaker, A. Aziz

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

B

  1. Baker, Kathryn T.

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  2. Banfield, Jillian F.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  3. Blackledge, Neil P.

    • Polycomb repressive complex 1 shapes the nucleosome landscape but not accessibility at target genes Genome Res. October 2018 28: 1494-1507; Published in Advance August 28, 2018, doi:10.1101/gr.237180.118
      OPEN ACCESS ARTICLE

  4. Buckler, Edward S.

  5. Bukowski, Robert

C

  1. Chakravarti, Aravinda

    • Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
      OPEN ACCESS ARTICLE

  2. Chen, Mingsheng

  3. Conn, Danyal

    • Phenotypically distinct female castes in honey bees are defined by alternative chromatin states during larval development Genome Res. October 2018 28: 1532-1542; Published in Advance August 22, 2018, doi:10.1101/gr.236497.118
      OPEN ACCESS ARTICLE

  4. Corbo, Joseph C.

    • A massively parallel reporter assay reveals context-dependent activity of homeodomain binding sites in vivo Genome Res. October 2018 28: 1520-1531; Published in Advance August 29, 2018, doi:10.1101/gr.231886.117

  5. Crawford, Gregory E.

    • Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
      OPEN ACCESS ARTICLE

D

  1. Dattani, Anish

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

  2. DiGiulio, Daniel B.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  3. Dougherty, Max L.

E

  1. Egri, Shawn

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  2. Eichler, Evan E.

F

  1. Fursova, Nadezda A.

    • Polycomb repressive complex 1 shapes the nucleosome landscape but not accessibility at target genes Genome Res. October 2018 28: 1494-1507; Published in Advance August 28, 2018, doi:10.1101/gr.237180.118
      OPEN ACCESS ARTICLE

G

  1. Gandhi, Shashi

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  2. Goltsman, Daniela S. Aliaga

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  3. Goren, Alon

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

H

  1. Halushka, Marc K.

    • Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
      OPEN ACCESS ARTICLE

  2. Han, Jing-Dong J.

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

  3. He, Dajian

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

  4. He, Xiechao

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

  5. Hipp, Michael J.

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  6. Holmes, Susan P.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  7. Hosokawa, Hiroyuki

    • Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1) Genome Res. October 2018 28: 1508-1519; Published in Advance August 31, 2018, doi:10.1101/gr.231423.117

  8. Hughes, Andrew E.O.

    • A massively parallel reporter assay reveals context-dependent activity of homeodomain binding sites in vivo Genome Res. October 2018 28: 1520-1531; Published in Advance August 29, 2018, doi:10.1101/gr.231886.117

  9. Hughes, Samantha

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

  10. Hurd, Paul J.

    • Phenotypically distinct female castes in honey bees are defined by alternative chromatin states during larval development Genome Res. October 2018 28: 1532-1542; Published in Advance August 22, 2018, doi:10.1101/gr.236497.118
      OPEN ACCESS ARTICLE

  11. Hurst, Laurence D.

J

  1. Jaffe, Jacob D.

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  2. Javasky, Elisheva

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

K

  1. Kao, Damian

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

  2. Kaplan, Noam

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  3. Kapoor, Ashish

    • Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
      OPEN ACCESS ARTICLE

  4. Kennedy, Scott R.

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  5. King, Hamish W.

    • Polycomb repressive complex 1 shapes the nucleosome landscape but not accessibility at target genes Genome Res. October 2018 28: 1494-1507; Published in Advance August 28, 2018, doi:10.1101/gr.237180.118
      OPEN ACCESS ARTICLE

  6. Klose, Robert J.

    • Polycomb repressive complex 1 shapes the nucleosome landscape but not accessibility at target genes Genome Res. October 2018 28: 1494-1507; Published in Advance August 28, 2018, doi:10.1101/gr.237180.118
      OPEN ACCESS ARTICLE

  7. Kohrn, Brendan F.

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  8. Kremling, Karl A.G.

L

  1. Lai, Alvina

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

  2. Lee, Dongwon

    • Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
      OPEN ACCESS ARTICLE

  3. Li, Bo

  4. Li, Yizhou

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

  5. Lian, Shenyi

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  6. Liu, Denghui

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

  7. Loubet-Senear, Kaitlyn

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  8. Lowe, Robert

    • Phenotypically distinct female castes in honey bees are defined by alternative chromatin states during larval development Genome Res. October 2018 28: 1532-1542; Published in Advance August 22, 2018, doi:10.1101/gr.236497.118
      OPEN ACCESS ARTICLE

M

  1. Maleszka, Joanna

    • Phenotypically distinct female castes in honey bees are defined by alternative chromatin states during larval development Genome Res. October 2018 28: 1532-1542; Published in Advance August 22, 2018, doi:10.1101/gr.236497.118
      OPEN ACCESS ARTICLE

  2. Maleszka, Ryszard

    • Phenotypically distinct female castes in honey bees are defined by alternative chromatin states during larval development Genome Res. October 2018 28: 1532-1542; Published in Advance August 22, 2018, doi:10.1101/gr.236497.118
      OPEN ACCESS ARTICLE

  3. Mihaylova, Yuliana

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

  4. Munson, Katherine M.

  5. Myers, Connie A.

    • A massively parallel reporter assay reveals context-dependent activity of homeodomain binding sites in vivo Genome Res. October 2018 28: 1520-1531; Published in Advance August 29, 2018, doi:10.1101/gr.231886.117

N

  1. Nachmanson, Daniela

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  2. Nelson, Bradley J.

  3. Nowakowski, Tomasz J.

P

  1. Penn, Osnat

  2. Pollen, Alex A.

  3. Proctor, Diana M.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

R

  1. Relman, David A.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  2. Risques, Rosa Ana

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  3. Robaczewska, Anna

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  4. Romay, Maria C.

  5. Rothbart, Scott B.

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  6. Rothenberg, Ellen V.

    • Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1) Genome Res. October 2018 28: 1508-1519; Published in Advance August 31, 2018, doi:10.1101/gr.231423.117

S

  1. Safi, Alexias

    • Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
      OPEN ACCESS ARTICLE

  2. Sahu, Sounak

    • Epigenetic analyses of planarian stem cells demonstrate conservation of bivalent histone modifications in animal stem cells Genome Res. October 2018 28: 1543-1554; Published in Advance August 24, 2018, doi:10.1101/gr.239848.118

  3. Salk, Jesse J.

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  4. Sandler, Oded

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  5. Savisaar, Rosina

  6. Schmidt, Elizabeth K.

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  7. Shamir, Inbal

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  8. Shaw, Gary M.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  9. Sigvardsson, Mikael

    • Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1) Genome Res. October 2018 28: 1508-1519; Published in Advance August 31, 2018, doi:10.1101/gr.231423.117

  10. Simon, Itamar

    • Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns Genome Res. October 2018 28: 1455-1466; Published in Advance August 30, 2018, doi:10.1101/gr.230300.117

  11. Song, Lingyun

    • Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants Genome Res. October 2018 28: 1577-1588; Published in Advance August 23, 2018, doi:10.1101/gr.234633.118
      OPEN ACCESS ARTICLE

  12. Stevenson, David K.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  13. Strid, Tobias

    • Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1) Genome Res. October 2018 28: 1508-1519; Published in Advance August 31, 2018, doi:10.1101/gr.231423.117

  14. Sun, Christine L.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  15. Sun, Chunli

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

T

  1. Thomas, Brian C.

    • Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome Genome Res. October 2018 28: 1467-1480; Published in Advance September 19, 2018, doi:10.1101/gr.236000.118

  2. Tian, Bin

  3. Tretiakova, Maria

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  4. Tseng, Elizabeth

U

  1. Underwood, Jason G.

  2. Ungerbäck, Jonas

    • Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1) Genome Res. October 2018 28: 1508-1519; Published in Advance August 31, 2018, doi:10.1101/gr.231423.117

W

  1. Wang, Ruijia

  2. Wang, Xinyi

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

  3. Wang, Xun

    • Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1) Genome Res. October 2018 28: 1508-1519; Published in Advance August 31, 2018, doi:10.1101/gr.231423.117

  4. Williams, Brian A.

    • Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1) Genome Res. October 2018 28: 1508-1519; Published in Advance August 31, 2018, doi:10.1101/gr.231423.117

  5. Wojciechowski, Marek

    • Phenotypically distinct female castes in honey bees are defined by alternative chromatin states during larval development Genome Res. October 2018 28: 1532-1542; Published in Advance August 22, 2018, doi:10.1101/gr.236497.118
      OPEN ACCESS ARTICLE

  6. Wu, Penghao

X

  1. Xie, En

Y

  1. Yan, Lanzhen

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

  2. Yehia, Ghassan

Z

  1. Zhang, Yuezheng

    • Targeted genome fragmentation with CRISPR/Cas9 enables fast and efficient enrichment of small genomic regions and ultra-accurate sequencing with low DNA input (CRISPR-DS) Genome Res. October 2018 28: 1589-1599; Published in Advance September 19, 2018, doi:10.1101/gr.235291.118

  2. Zheng, Dinghai

  3. Zheng, Ping

    • Single-cell RNA-sequencing reveals the existence of naive and primed pluripotency in pre-implantation rhesus monkey embryos Genome Res. October 2018 28: 1481-1493; Published in Advance August 28, 2018, doi:10.1101/gr.233437.117

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