JIL-1 and histone phosphoacetylation at promoters correlate with transcript levels genome-wide. (A) RNA expression levels for Kc167 cells were obtained from modENCODE, and the TSSs were sorted by expression level from highest to lowest and given up/downstream orientation according to strand. The total number of reads is plotted for each ChIP-seq data set in 20-bp bins covering 1 kb upstream of and downstream from each TSS and viewed in Java Treeview. (B) All TSSs were broken down into five equal bins according to expression levels, and the average number of reads for each 20-bp region for all the TSSs in that bin is plotted 1 kb upstream and downstream for each bin.
