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Research

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  Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection

  • Asger Hobolth,
  • Julien Y. Dutheil,
  • John Hawks,
  • Mikkel H. Schierup,
  • and Thomas Mailund

  Genome Res. March 2011 21: 349-356; Published in Advance January 26, 2011, doi:10.1101/gr.114751.110
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  Age-dependent gain of alternative splice forms and biased duplication explain the relation between splicing and duplication

  • Julien Roux and
  • Marc Robinson-Rechavi

  Genome Res. March 2011 21: 357-363; Published in Advance December 20, 2010, doi:10.1101/gr.113803.110
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  Interactome mapping suggests new mechanistic details underlying Alzheimer's disease

  • Montserrat Soler-López,
  • Andreas Zanzoni,
  • Ricart Lluís,
  • Ulrich Stelzl,
  • and Patrick Aloy

  Genome Res. March 2011 21: 364-376; Published in Advance December 16, 2010, doi:10.1101/gr.114280.110
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  Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription

  • Larry D. Mesner,
  • Veena Valsakumar,
  • Neerja Karnani,
  • Anindya Dutta,
  • Joyce L. Hamlin,
  • and Stefan Bekiranov

  Genome Res. March 2011 21: 377-389; Published in Advance December 20, 2010, doi:10.1101/gr.111328.110
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  Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation

  • Joanna Y. Ip,
  • Dominic Schmidt,
  • Qun Pan,
  • Arun K. Ramani,
  • Andrew G. Fraser,
  • Duncan T. Odom,
  • and Benjamin J. Blencowe

  Genome Res. March 2011 21: 390-401; Published in Advance December 16, 2010, doi:10.1101/gr.111070.110
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  Clcn4-2 genomic structure differs between the X locus in Mus spretus and the autosomal locus in Mus musculus: AT motif enrichment on the X

  • Di Kim Nguyen,
  • Fan Yang,
  • Rajinder Kaul,
  • Can Alkan,
  • Anthony Antonellis,
  • Karen F. Friery,
  • Baoli Zhu,
  • Pieter J. de Jong,
  • and Christine M. Disteche

  Genome Res. March 2011 21: 402-409; Published in Advance January 31, 2011, doi:10.1101/gr.108563.110
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  Nucleotide composition-linked divergence of vertebrate core promoter architecture

  • Simon J. van Heeringen,
  • Waseem Akhtar,
  • Ulrike G. Jacobi,
  • Robert C. Akkers,
  • Yutaka Suzuki,
  • and Gert Jan C. Veenstra

  Genome Res. March 2011 21: 410-421; Published in Advance January 10, 2011, doi:10.1101/gr.111724.110
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  Dioxin receptor and SLUG transcription factors regulate the insulator activity of B1 SINE retrotransposons via an RNA polymerase switch

  • Angel Carlos Román,
  • Francisco J. González-Rico,
  • Eduardo Moltó,
  • Henar Hernando,
  • Ana Neto,
  • Cristina Vicente-Garcia,
  • Esteban Ballestar,
  • José L. Gómez-Skarmeta,
  • Jana Vavrova-Anderson,
  • Robert J. White,
  • Lluís Montoliu,
  • and Pedro M. Fernández-Salguero

  Genome Res. March 2011 21: 422-432; Published in Advance February 3, 2011, doi:10.1101/gr.111203.110
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  Genome-scale RNAi on living-cell microarrays identifies novel regulators of Drosophila melanogaster TORC1–S6K pathway signaling

  • Robert A. Lindquist,
  • Kathleen A. Ottina,
  • Douglas B. Wheeler,
  • Peggy P. Hsu,
  • Carson C. Thoreen,
  • David A. Guertin,
  • Siraj M. Ali,
  • Shomit Sengupta,
  • Yoav D. Shaul,
  • Michael R. Lamprecht,
  • Katherine L. Madden,
  • Adam R. Papallo,
  • Thouis R. Jones,
  • David M. Sabatini,
  • and Anne E. Carpenter

  Genome Res. March 2011 21: 433-446; Published in Advance January 14, 2011, doi:10.1101/gr.111492.110
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