Volume 20, Issue 11 | November 2010

Research
- - De novo rates and selection of large copy number variation
    Andy Itsara
    Hao Wu
    Joshua D. Smith
    Deborah A. Nickerson
    Isabelle Romieu
    First Published September 14, 2010
  - Radiation pharmacogenomics: A genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines
    Nifang Niu
    Yuxin Qin
    Brooke L. Fridley
    Junmei Hou
    Krishna R. Kalari
    Minjia Zhu
    ...[+1 authors]...,
    Tse-Yu Wu
    Gregory D. Jenkins
    Anthony Batzler
    Liewei Wang
    First Published October 5, 2010
  - A unique H3K4me2 profile marks tissue-specific gene regulation
    Aleksandra Pekowska
    Touati Benoukraf
    Pierre Ferrier
    Salvatore Spicuglia
    First Published September 14, 2010
  - Genomic signatures of germline gene expression
    Graham McVicker
    Phil Green
    First Published August 4, 2010
  - CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors
    Joseph C. Corbo
    Karen A. Lawrence
    Marcus Karlstetter
    Connie A. Myers
    Musa Abdelaziz
    William Dirkes Karin Weigelt Martin Seifert
    ...[+3 authors]...,
    Vladimir Benes
    Lars G. Fritsche
    Bernhard H.F. Weber
    Thomas Langmann
    First Published August 6, 2010
  - Age-dependent chromosomal distribution of male-biased genes in Drosophila
    Yong E. Zhang
    Maria D. Vibranovski
    Benjamin H. Krinsky
    Manyuan Long
    First Published August 26, 2010
  - Genome scanning of Amazonian Plasmodium falciparum shows subtelomeric instability and clindamycin-resistant parasites
    Neekesh V. Dharia
    David Plouffe
    Selina E.R. Bopp
    Gonzalo E. González-Páez
    Carmen Lucas
    Carola Salas Valeria Soberon
    ...[+2 authors]...,
    Badry Bursulaya
    Tadeusz J. Kochel
    David J. Bacon
    Elizabeth A. Winzeler
    First Published September 9, 2010
  - Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution
    Florent Murat
    Jian-Hong Xu
    Eric Tannier
    Michael Abrouk
    Nicolas Guilhot
    First Published September 28, 2010
  - Shifts in the intensity of purifying selection: An analysis of genome-wide polymorphism data from two closely related yeast species
    Eyal Elyashiv
    Kevin Bullaughey
    Shmuel Sattath
    Yosef Rinott
    Molly Przeworski
    First Published September 4, 2010
  - Young proteins experience more variable selection pressures than old proteins
    Anchal Vishnoi
    Sergey Kryazhimskiy
    Georgii A. Bazykin
    Sridhar Hannenhalli
    Joshua B. Plotkin
    First Published October 4, 2010
  - Overlapping codes within protein-coding sequences
    Shalev Itzkovitz
    Eran Hodis
    Eran Segal
    First Published September 14, 2010
Methods
- - Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    Todd A. Fehniger
    Todd Wylie
    Elizabeth Germino
    Jeffrey W. Leong
    Vincent J. Magrini
    Sunita Koul Catherine R. Keppel Stephanie E. Schneider Daniel C. Koboldt Ryan P. Sullivan Michael E. Heinz Seth D. Crosby Rakesh Nagarajan
    ...[+8 authors]...,
    Giridharan Ramsingh
    Daniel C. Link
    Timothy J. Ley
    Elaine R. Mardis
    First Published October 8, 2010
  - Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes
    Lena Tasse
    Juliette Bercovici
    Sandra Pizzut-Serin
    Patrick Robe
    Julien Tap
    Christophe Klopp Brandi L. Cantarel Pedro M. Coutinho Bernard Henrissat Marion Leclerc
    ...[+5 authors]...,
    Joël Doré
    Pierre Monsan
    Magali Remaud-Simeon
    Gabrielle Potocki-Veronese
    First Published September 14, 2010
Resource
- - Detecting copy number variation with mated short reads
    Paul Medvedev
    Marc Fiume
    Misko Dzamba
    Tim Smith
    Michael Brudno
    First Published August 30, 2010

Table of Contents

Volume 20, Issue 11 | November 2010

Research

De novo rates and selection of large copy number variation

Radiation pharmacogenomics: A genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines

A unique H3K4me2 profile marks tissue-specific gene regulation

Genomic signatures of germline gene expression

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors

Age-dependent chromosomal distribution of male-biased genes in Drosophila

Genome scanning of Amazonian Plasmodium falciparum shows subtelomeric instability and clindamycin-resistant parasites

Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution

Shifts in the intensity of purifying selection: An analysis of genome-wide polymorphism data from two closely related yeast species

Young proteins experience more variable selection pressures than old proteins

Overlapping codes within protein-coding sequences

Methods

Next-generation sequencing identifies the natural killer cell microRNA transcriptome

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes

Resource

Detecting copy number variation with mated short reads

Table of Contents

Volume 20, Issue 11 | November 2010

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Research

Methods

Resource