Table of Contents

May 2007; 17 (5)

ARTICLES

  • Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates

    • Hiroshi Kikuta,
    • Mary Laplante,
    • Pavla Navratilova,
    • Anna Z. Komisarczuk,
    • Pär G. Engström,
    • David Fredman,
    • Altuna Akalin,
    • Mario Caccamo,
    • Ian Sealy,
    • Kerstin Howe,
    • Julien Ghislain,
    • Guillaume Pezeron,
    • Philippe Mourrain,
    • Staale Ellingsen,
    • Andrew C. Oates,
    • Christine Thisse,
    • Bernard Thisse,
    • Isabelle Foucher,
    • Birgit Adolf,
    • Andrea Geling,
    • Boris Lenhard,
    • and Thomas S. Becker
    Genome Res. May 2007 17: 545-555; Published in Advance March 26, 2007, doi:10.1101/gr.6086307

  • Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs

    • Jasmina Ponjavic,
    • Chris P. Ponting,
    • and Gerton Lunter
    Genome Res. May 2007 17: 556-565; Published in Advance March 26, 2007, doi:10.1101/gr.6036807

  • The modifier of Min 2 (Mom2) locus: Embryonic lethality of a mutation in the Atp5a1 gene suggests a novel mechanism of polyp suppression

    • Amy A. Baran,
    • Karen A. Silverman,
    • Joseph Zeskand,
    • Revati Koratkar,
    • Ashley Palmer,
    • Kristen McCullen,
    • Walter J. Curran, Jr,
    • Tina Bocker Edmonston,
    • Linda D. Siracusa,
    • and Arthur M. Buchberg
    Genome Res. May 2007 17: 566-576; Published in Advance March 26, 2007, doi:10.1101/gr.6089707

  • Identification of mouse Duffy Antigen Receptor for Chemokines (Darc) as a BMD QTL gene

    • Bouchra Edderkaoui,
    • David J. Baylink,
    • Wesley G. Beamer,
    • Jon E. Wergedal,
    • Ryan Porte,
    • Asok Chaudhuri,
    • and Subburaman Mohan
    Genome Res. May 2007 17: 577-585; Published in Advance April 6, 2007, doi:10.1101/gr.6009507

LETTERS

  • Fine mapping of a swine quantitative trait locus for number of vertebrae and analysis of an orphan nuclear receptor, germ cell nuclear factor (NR6A1)

    • Satoshi Mikawa,
    • Takeya Morozumi,
    • Shin-Ichi Shimanuki,
    • Takeshi Hayashi,
    • Hirohide Uenishi,
    • Michiko Domukai,
    • Naohiko Okumura,
    • and Takashi Awata
    Genome Res. May 2007 17: 586-593; Published in Advance April 6, 2007, doi:10.1101/gr.6085507

  • The mode and tempo of genome size evolution in eukaryotes

    • Matthew J. Oliver,
    • Dmitri Petrov,
    • David Ackerly,
    • Paul Falkowski,
    • and Oscar M. Schofield
    Genome Res. May 2007 17: 594-601; Published in Advance April 9, 2007, doi:10.1101/gr.6096207

  • Distinct mechanisms for trans-mediated mobilization of cellular RNAs by the LINE-1 reverse transcriptase

    • José L. Garcia-Perez,
    • Aurélien J. Doucet,
    • Alain Bucheton,
    • John V. Moran,
    • and Nicolas Gilbert
    Genome Res. May 2007 17: 602-611; Published in Advance April 6, 2007, doi:10.1101/gr.5870107

  • Rapid evolution of an X-linked microRNA cluster in primates

    • Rui Zhang,
    • Yi Peng,
    • Wen Wang,
    • and Bing Su
    Genome Res. May 2007 17: 612-617; Published in Advance April 6, 2007, doi:10.1101/gr.6146507

  • Fast-X on the Z: Rapid evolution of sex-linked genes in birds

    • Judith E. Mank,
    • Erik Axelsson,
    • and Hans Ellegren
    Genome Res. May 2007 17: 618-624; Published in Advance April 6, 2007, doi:10.1101/gr.6031907

  • CpG methylation is targeted to transcription units in an invertebrate genome

    • Miho M. Suzuki,
    • Alastair R.W. Kerr,
    • Dina De Sousa,
    • and Adrian Bird
    Genome Res. May 2007 17: 625-631; Published in Advance April 9, 2007, doi:10.1101/gr.6163007
    OPEN ACCESS ARTICLE

  • A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection

    • Kousuke Hanada,
    • Xu Zhang,
    • Justin O. Borevitz,
    • Wen-Hsiung Li,
    • and Shin-Han Shiu
    Genome Res. May 2007 17: 632-640; Published in Advance March 29, 2007, doi:10.1101/gr.5836207

Methods

  • X chromosome cDNA microarray screening identifies a functional PLP2 promoter polymorphism enriched in patients with X-linked mental retardation

    • Lilei Zhang,
    • Chunfa Jie,
    • Cassandra Obie,
    • Fatima Abidi,
    • Charles E. Schwartz,
    • Roger E. Stevenson,
    • David Valle,
    • and Tao Wang
    Genome Res. May 2007 17: 641-648; Published in Advance April 6, 2007, doi:10.1101/gr.5336307

  • Efficient target-selected mutagenesis in Caenorhabditis elegans: Toward a knockout for every gene

    • Edwin Cuppen,
    • Eelke Gort,
    • Esther Hazendonk,
    • Josine Mudde,
    • José van de Belt,
    • Isaäc J. Nijman,
    • Victor Guryev,
    • and Ronald H.A. Plasterk
    Genome Res. May 2007 17: 649-658; Published in Advance April 6, 2007, doi:10.1101/gr.6080607

RESOURCE

  • PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data

    • Ken Chen,
    • Michael D. McLellan,
    • Li Ding,
    • Michael C. Wendl,
    • Yumi Kasai,
    • Richard K. Wilson,
    • and Elaine R. Mardis
    Genome Res. May 2007 17: 659-666; Published in Advance April 6, 2007, doi:10.1101/gr.6151507
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This Issue

May 2007; 17 (5)
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  1. ARTICLES
  2. LETTERS
  3. Methods
  4. RESOURCE

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