Volume 13, Issue 3 | March 2003

ARTICLES
- - Gene Expression Analyses of Arabidopsis Chromosome 2 Using a Genomic DNA Amplicon Microarray
    Heenam Kim
    Erik C. Snesrud
    Brian Haas
    Foo Cheung
    Christopher D. Town
    First Published March 1, 2003
  - Genomic DNA Insertions and Deletions Occur Frequently Between Humans and Nonhuman Primates
    Kelly A. Frazer
    Xiyin Chen
    David A. Hinds
    P.V. Krishna Pant
    Nila Patil
    First Published February 12, 2003
  - Large-Scale Variation Among Human and Great Ape Genomes Determined by Array Comparative Genomic Hybridization
    Devin P. Locke
    Richard Segraves
    Lucia Carbone
    Nicoletta Archidiacono
    Donna G. Albertson
    First Published March 1, 2003
LETTERS
- - Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome
    Ge Liu
    NISC Comparative Sequencing Program
    Shaying Zhao
    Jeffrey A. Bailey
    S. Cenk Sahinalp
    First Published March 1, 2003
  - Segmental Duplications in Euchromatic Regions of Human Chromosome 5: A Source of Evolutionary Instability and Transcriptional Innovation
    Anouk Courseaux
    Florence Richard
    Josiane Grosgeorge
    Christine Ortola
    Agnes Viale
    First Published February 12, 2003
  - Genome Duplication, a Trait Shared by 22,000 Species of Ray-Finned Fish
    John S. Taylor
    Ingo Braasch
    Tancred Frickey
    Axel Meyer
    Yves Van de Peer
    First Published March 1, 2003
  - Large-Scale Analysis of the Meningococcus Genome by Gene Disruption: Resistance to Complement-Mediated Lysis
    Marie-Claude Geoffroy
    Stéphanie Floquet
    Arnaud Métais
    Xavier Nassif
    Vladimir Pelicic
    First Published February 12, 2003
  - Schizosaccharomyces pombe Essential Genes: A Pilot Study
    Anabelle Decottignies
    Isabel Sanchez-Perez
    Paul Nurse
    First Published March 1, 2003
  - The Genetic Core of the Universal Ancestor
    J. Kirk Harris
    Scott T. Kelley
    George B. Spiegelman
    Norman R. Pace
    First Published February 12, 2003
  - A Global Search Reveals Epistatic Interaction Between QTL for Early Growth in the Chicken
    Örjan Carlborg
    Susanne Kerje
    Karin Schütz
    Lina Jacobsson
    Per Jensen
    First Published March 1, 2003
  - The Phylogenetic Extent of Metabolic Enzymes and Pathways
    José Manuel Peregrin-Alvarez
    Sophia Tsoka
    Christos A. Ouzounis
    First Published March 1, 2003
  - Comparative Analysis of Superintegrons: Engineering Extensive Genetic Diversity in the Vibrionaceae
    Dean A. Rowe-Magnus
    Anne-Marie Guerout
    Latefa Biskri
    Philippe Bouige
    Didier Mazel
    First Published March 1, 2003
  - Gene Discovery in the Apicomplexa as Revealed by EST Sequencing and Assembly of a Comparative Gene Database
    Li Li
    Brian P. Brunk
    Jessica C. Kissinger
    Deana Pape
    Keliang Tang
    Robert H. Cole John Martin Todd Wylie Mike Dante Steven J. Fogarty Daniel K. Howe Paul Liberator Carmen Diaz Jennifer Anderson Michael White Maria E. Jerome Emily A. Johnson Jay A. Radke Christian J. Stoeckert
    ...[+14 authors]...,
    Robert H. Waterston
    Sandra W. Clifton
    David S. Roos
    L. David Sibley
    First Published March 1, 2003
  - 15,000 Unique Zebrafish EST Clusters and Their Future Use in Microarray for Profiling Gene Expression Patterns During Embryogenesis
    Jane Lo
    Sorcheng Lee
    Min Xu
    Feng Liu
    Hua Ruan
    Alvin Eun Yawen He
    ...[+2 authors]...,
    Weiping Ma
    Weefuen Wang
    Zilong Wen
    Jinrong Peng
    First Published March 1, 2003
METHODS
- - Genotyping on a Thermal Gradient DNA Chip
    Tomoharu Kajiyama
    Yuji Miyahara
    Larry J. Kricka
    Peter Wilding
    David J. Graves
    First Published March 1, 2003
  - A Highly Efficient Recombineering-Based Method for Generating Conditional Knockout Mutations
    Pentao Liu
    Nancy A. Jenkins
    Neal G. Copeland
    First Published March 1, 2003
  - The Development of a Highly Informative Mouse Simple Sequence Length Polymorphism (SSLP) Marker Set and Construction of a Mouse Family Tree Using Parsimony Analysis
    Philip D. Witmer
    Kimberly F. Doheny
    Marcia K. Adams
    Corinne D. Boehm
    Jane S. Dizon
    Janet L. Goldstein Tira M. Templeton Ariana M. Wheaton Penny N. Dong Elizabeth W. Pugh Robert L. Nussbaum
    ...[+6 authors]...,
    Kent Hunter
    Jennifer A. Kelmenson
    Lucy B. Rowe
    Michael J. Brownstein
    First Published March 1, 2003
  - Screening of Gene-Associated Polymorphisms by Use of In-Gel Competitive Reassociation and EST (cDNA) Array Hybridization
    Koshichi Gotoh
    Michio Oishi
    First Published March 1, 2003
  - SLAM: Cross-Species Gene Finding and Alignment with a Generalized Pair Hidden Markov Model
    Marina Alexandersson
    Simon Cawley
    Lior Pachter
    First Published February 12, 2003
  - A Classification-Based Machine Learning Approach for the Analysis of Genome-Wide Expression Data
    James Lyons-Weiler
    Satish Patel
    Soumyaroop Bhattacharya
    First Published March 1, 2003
  - Large-Scale Identification of Single-Feature Polymorphisms in Complex Genomes
    Justin O. Borevitz
    David Liang
    David Plouffe
    Hur-Song Chang
    Tong Zhu
    First Published February 12, 2003
RESOURCE
- - Large-Scale Discovery of Induced Point Mutations With High-Throughput TILLING
    Bradley J. Till
    Steven H. Reynolds
    Elizabeth A. Greene
    Christine A. Codomo
    Linda C. Enns
    Jessica E. Johnson Chris Burtner Anthony R. Odden Kim Young
    ...[+4 authors]...,
    Nicholas E. Taylor
    Jorja G. Henikoff
    Luca Comai
    Steven Henikoff
    First Published March 1, 2003

Table of Contents

Volume 13, Issue 3 | March 2003

ARTICLES

Gene Expression Analyses of Arabidopsis Chromosome 2 Using a Genomic DNA Amplicon Microarray

Genomic DNA Insertions and Deletions Occur Frequently Between Humans and Nonhuman Primates

Large-Scale Variation Among Human and Great Ape Genomes Determined by Array Comparative Genomic Hybridization

LETTERS

Analysis of Primate Genomic Variation Reveals a Repeat-Driven Expansion of the Human Genome

Segmental Duplications in Euchromatic Regions of Human Chromosome 5: A Source of Evolutionary Instability and Transcriptional Innovation

Genome Duplication, a Trait Shared by 22,000 Species of Ray-Finned Fish

Large-Scale Analysis of the Meningococcus Genome by Gene Disruption: Resistance to Complement-Mediated Lysis

Schizosaccharomyces pombe Essential Genes: A Pilot Study

The Genetic Core of the Universal Ancestor

A Global Search Reveals Epistatic Interaction Between QTL for Early Growth in the Chicken

The Phylogenetic Extent of Metabolic Enzymes and Pathways

Comparative Analysis of Superintegrons: Engineering Extensive Genetic Diversity in the Vibrionaceae

Gene Discovery in the Apicomplexa as Revealed by EST Sequencing and Assembly of a Comparative Gene Database

15,000 Unique Zebrafish EST Clusters and Their Future Use in Microarray for Profiling Gene Expression Patterns During Embryogenesis

METHODS

Genotyping on a Thermal Gradient DNA Chip

A Highly Efficient Recombineering-Based Method for Generating Conditional Knockout Mutations

The Development of a Highly Informative Mouse Simple Sequence Length Polymorphism (SSLP) Marker Set and Construction of a Mouse Family Tree Using Parsimony Analysis

Screening of Gene-Associated Polymorphisms by Use of In-Gel Competitive Reassociation and EST (cDNA) Array Hybridization

SLAM: Cross-Species Gene Finding and Alignment with a Generalized Pair Hidden Markov Model

A Classification-Based Machine Learning Approach for the Analysis of Genome-Wide Expression Data

Large-Scale Identification of Single-Feature Polymorphisms in Complex Genomes

RESOURCE

Large-Scale Discovery of Induced Point Mutations With High-Throughput TILLING

Table of Contents

Volume 13, Issue 3 | March 2003

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ARTICLES

LETTERS

METHODS

RESOURCE