Characterizing Embryonic Gene Expression Patterns in the Mouse Using Nonredundant Sequence-Based Selection

Table 2.

Sequence Analysis of cDNA Clones With Restricted Expression


Sequence ID

Frequency

Representative ID

Description
t8219b01 1
t7822b10 2 ENSMUSG00000013236 Protein-tyrosine phosphatase, receptor-type (Ptpt9; EC 3.1.3.48)
r8220b29 1 TC469486
s8609b60 2 ENSMUSG00000019970 Serum and glucocorticoid-regulated kinase (Sgk; EC 2.7.1)
m8708a09 4 ENSMUSG00000021728 Embigin precursor, also known as Teratocarcinoma glycoprotein 70 (GP-70)
v8130b53 9 TC461859 Solute carrier family 2 (facilitated glucose transporter) member 3 (Slc2a3)
t7825b42 3 TC511260 Sp120 (Hnrpu)
s8609b24 1 ENSMUSG00000039878 Similar to LIV-1, estrogen-regulated
r8316a33 1 ENSMUSG00000024253 Dynein 2 light intermediate chain (mD2LIC)
v8130b25 1 ENSMUSG00000028162
r8707a53 3 ENSMUSG00000023906 Claudin-6
m8708a22 1 ENSMUSG00000039676 Calcyphosine
p7822b53 1 ENSMUSG00000005505 Weakly similar to ring canal protein; contains BTB/POZ domain
t8130b59 1 TC503400
t8417b56 1 ENSMUSG0000002764 Neuronatin, also known as Peg5 (isoform 2)
t8219b25 1 TC488224 Similar (16%) to KIAA0802 protein (Homo sapiens)
w8609b57 1 ENSMUSG00000029032 Neuroblastoma; similar to Rho GEF 16;
t7822b19 1 ENSMUSG00000021681 Paternally expressed gene 3 (Peg3)
k8709a24 1 ENSMUSG00000031665 Sal-like 1 (Sall1)
r8220b09 1 TC501397 Silica-induced gene 41 (Silg41); similar to arg/ser-rich splicing factor (transformer2)
t8130b26 1 ENSMUSG00000042142 Rb-binding protein 2 (Rb-BP2); also known as Plu-1
m8708a39 1 ENSMUSG00000022761 Leucine-zipper-like transcriptional regulator 1 (Lztr1)
s8129b58 1 ENSMUSG00000026833 Pancortins 1 and/or 3
k8220b03 1 ENSMUSG00000029381 Shroom (actin binding protein) (Shrm)
r8220b57 1 ENSMUSG00000005566 Transcription intermediary factor 1-β (Tif1-β)
r8319a44 2 14-3-3 protein σ
k8709a20 2 ENSMUSG00000020849 14-3-3 protein ϵ (protein kinase C inhibitor protein-1)
k8710a07 1 ENSMUSG00000021667 Nop seven associated protein 2 (Nsa2p); also known as Lnr42, TINP1 or HCLG1
t8219b26
1
ENSMUSG00000032376
Ubiquitin-specific protease 3 (Ubp7)
  • The table shows 29 cDNAs with restricted patterns of expression. The clones are shown in the same order as in Figure 1, with the first three being members of the visceral endoderm synexpression group. Headings represent (1) the sequence identification number, (2) the number of times the sequence was isolated, (3) the ENSEMBL gene number of the cDNA or its TIGR Cluster number, and (4) gene name or family. Genes for which no description is appended bear no resemblance to any other in the databases.

This Article

  1. Genome Res. 13: 2609-2620

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