Time for a Unified System of Mutation Description and Reporting: A Review of Locus-Specific Mutation Databases

Table 2.

Summary of Raw Data for LSDBs

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  • Numbers indicate percent Yes unless otherwise indicated. Study period was from June 21 to July 18, 2001.

  • Clinical information or information for patients only.

  • USA 28, UK 14, FR 9, FIN 8, NL 8, CA 8, BEL 4, SW 3, GER 3, IS 2, AUS 1, DEN 1, IRL 1 IT 1, JP 1, NZ 1, SP 1.

  • Not including links to OMIM.

  • 3D models, schematic models, protein maps, protein mutation maps, linkage, tissue distribution.

  • Phylogenetic tree, maps of interacting proteins, primer sequences, methods, comments and source of mutations, therapies.

  • Including one subscription to have access to the most recent data.

  • Other software include pdf, Filemaker Pro, excel, JAVA, UMD, MuStar, LINUX, mySQL, Mutation View, MUTbase.

  • Antonarakis et al. 1998.

  • Linkage, Iocus, CpG, genotype, domain, reference, consequences, exon, amino acid change, sample source, detection methods, chromosomes, proband tumour type, nucleotide change, restriction site change, intragenic position, RNA change, keyword, accession number, OMIM number.

  • Data collected January 2002.

This Article

  1. Genome Res. 12: 680-688

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