Extraction of Functional Binding Sites from Unique Regulatory Regions: The Drosophila Early Developmental Enhancers

Table 1.

Comparison between the Refined and Consistent Maps

graphic
  • Distribution of sites shown for theeven-skipped strip 2 region. Most of the experimentally verified binding sites shown are shared between the two maps (hits, shown in red). Two known Bicoid sites false-negatives in blue) are missing in the consistent map due to their low positional weight matrix score. In vitro binding assays support the suggestion of low affinity for these two Bicoid sites (Wilson et al. 1996). High-scoring matches (false-positives) to Bicoid, Krüppel, and Giant are shown in green.

This Article

  1. Genome Res. 12: 470-481

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