A Proteomic View on Genome-Based Signal Peptide Predictions

Table 2.

Extracellular Proteins Probably under DegU Control

Proteins Functions Regulation
Metabolism of carbohydrates
AmyE alpha-amylase +
BgIS endo-beta-1,3-1,4 glucanase +
PelB pectate lyase +
YnfF endo-xylanase +
Metabolism of proteins
AprE serine alkaline protease (subtilisin E) +
Bpr bacillopeptidase F +
Ggt gamma-glutamyltranspeptidase +
Mpr extracellular metalloprotease +
NprE extracellular neutral metalloprotease +
Vpr extracellular serine protease +
YwaD aminopeptidase +
Metabolism of nucleotides and nucleic acids
YfkN 2′,3′-cyclic-nucleotide 2′-phosphodiesterase +
Yurl ribonuclease +
Metabolism of the cell wall
LytD N-acetylglucosaminidase (major autolysin)
WapA cell wall-associated protein precursor
YwtD murein hydrolase
Mobility and chemotaxis
Hag flagellin protein
FlgK flagellar hook-associated protein 1 (HAP1)
FliD flagellar hook-associated protein 2 (HAP2)
Similar to unknown proteins
YlqB unknown
YxkC unknown
  • Extracellular proteins of which the synthesis is up-regulated in the degU32(hy) mutant are indicated (+). Proteins of which the synthesis is down-regulated are indicated by (−).

This Article

  1. Genome Res. 11: 1484-1502

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