Genome Evolution at the Genus Level: Comparison of Three Complete Genomes of Hyperthermophilic Archaea

Table 3.

Detection of Spurious Triangular Relationships in thePyrococcus Genomes

	*P. abyssi*	*P. horikoshii*	*P. furiosus*
Common set	1445	1419	1525
Biased ΔAF/ΔHF values only	108	99	118
Nonreciprocal homologs only	55	58	125
Both methods	65	45	54
Total	228	202	297
Putative true orthologs	1217	1217	1228

Published in Advance May 8, 2001, doi: 10.1101/gr.165301 Genome Res. 2001. 11: 981-993