Neuropeptides and Neuropeptide Receptors in the Drosophila melanogaster Genome

Table 3.

Locations and Phasing of Introns among Genes EncodingDrosophila Family A Peptide GPCRs

TM1 TM2 TM3 TM4 TM5 TM6 TM7
after G before D after D before P after P before P after P before P after P before P after P before P
CG6857 24 (1) 82 (1) 31 (2)
CG6881 24 (1) 14 (1) 66 (2)
CG5811 8 (2) 20 (2) 19 (0) 5 (0)
CG10626 12 (0) 2 (2) 16 (1) 17 (0)
Takr86C 10 (1) 7 (2) 11 (2) 13 (2)
Takr99D 6 (1) 7 (2) 13 (2) 17 (1)
CG10823 3 (0) 19 (1) 7 (2)
BACR48G21.1 13 (0)
CG1147 0 (1) 4 (0)
CG7395
CG12610 24 (0) 12 (0) 33 (0) 33 (1) 62 (2)
CG13995 24 (0) 57 (2)
CG14593 9 (2) 6 (0) 14 (2) 8 (0) 8 (2)
CG14484 9 (2) 8 (1) 8 (0) 22 (0) 11 (2)
CG8784 7 (1) 2 (2) 18 (0) 12 (1)
CG8795 7 (1) 2 (2) 18 (0) 12 (1)
CG9918 12 (1)
CG14575 7 (1) 28 (2) 15 (1) 14 (2) 4 (2)
CG14003 19 (2) 14 (0) 6 (0) 79 (0) 9 (2)
CG5911A/B 4 (0) 29 (1) 1 (2)
CG2114
CG16726 18 (0) 30 (2) 29 (1) 12 (0)
CG6986 10 (2) 22 (0) 18 (1) 32 (0) 32 (0)
CG13575
CG8985 15 (1)
CG13229 2 (1) 2 (2) 15 (2) 29 (2)
CG13803 1 (1) 15 (1)
CG5936 11 (1) 29 (2) 11 (2)
AlstR 7 (2) 18 (2) 14 (2) 35 (0) 23 (2) 3 (0)
CG10001 9 (0) 3 (0)_ _ _
CG7285 10 (0) 6 (0)
CG13702 10 (0) 18 (0)
GRHR 7 (1) 2 (0) 28
CG10698 2 (0) 17 (1) 20 (0)
CG6111 0 (1) 7 (1) 26 (1)
Fsh 12 (2) 31 (1) 30 (2) 9 (0)
rk
CG4187 28 (1) 7 (2) 6 (2) 14 (2) 11 (1)?
CG5042 23 (2) 19 (1)
  • Family A peptide GPCRs are listed in the same order as shown in Table 2. The position of each intron is given with respect to the nearest amino acid landmark (position 0, underlined): TM1, GX2 GNXLV; TM2, NX2NLAXADLL; TM3, SX3LX2ISXDRYX2IX2 P; TM4, AX7WX2SX5 P; TM5, FX2 PLX6YX2I; TM6, FX2CWXP; TM7, LX3NSX2NPXIY. Intron phase is specified as: ‖NNN phase 0; N‖NN, phase 1; NN‖N, phase 2 (where NNN is the codon and “‖” is the position of the intron). Shaded items indicate shared introns. Dashed line, intron shared in two related GPCR subgroups.

  • Only one out of multiple neighboring introns is indicated.

This Article

  1. Genome Res. 11: 1126-1142

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