Table of Contents

COMMENTARIES

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Life with 25,000 Genes
- R. Scott Poethig
Genome Res. March 1, 2001 11: 313-316; doi:10.1101/gr
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Genomics in Latin America: Reaching the Frontiers
- Pablo D. Rabinowicz
Genome Res. March 1, 2001 11: 319-322; doi:10.1101/gr.179501

PERSPECTIVE

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Using Mouse Genetics to Understand Infectious Disease Pathogenesis
- William F. Dietrich
Genome Res. March 1, 2001 11: 325-331; doi:10.1101/gr.173101

REPORTS

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First Pass Annotation of Promoters on Human Chromosome 22
- Matthias Scherf,
- Andreas Klingenhoff,
- Kornelie Frech,
- Kerstin Quandt,
- Ralf Schneider,
- Korbinian Grote,
- Matthias Frisch,
- Valérie Gailus-Durner,
- Alexander Seidel,
- Ruth Brack-Werner,
- and Thomas Werner
Genome Res. March 1, 2001 11: 333-340; doi:10.1101/gr.154601
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Identification of Human Epidermal Differentiation Complex (EDC)-Encoded Genes by Subtractive Hybridization of Entire YACs to a Gridded Keratinocyte cDNA Library
- Ingo Marenholz,
- Maja Zirra,
- David F. Fischer,
- Claude Backendorf,
- Andreas Ziegler,
- and Dietmar Mischke
Genome Res. March 1, 2001 11: 341-355; doi:10.1101/gr.114801

ARTICLE

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Genome Alignment, Evolution of Prokaryotic Genome Organization, and Prediction of Gene Function Using Genomic Context
- Yuri I. Wolf,
- Igor B. Rogozin,
- Alexey S. Kondrashov,
- and Eugene V. Koonin
Genome Res. March 1, 2001 11: 356-372; Published in Advance February 8, 2001, doi:10.1101/gr.161901

LETTERS

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Gene Duplication and the Structure of Eukaryotic Genomes
- Robert Friedman and
- Austin L. Hughes
Genome Res. March 1, 2001 11: 373-381; doi:10.1101/gr.155801
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A Dominant Modifier of Transgene Methylation Is Mapped by QTL Analysis to Mouse Chromosome 13
- Pascale Valenza-Schaerly,
- Benjamin Pickard,
- Jörn Walter,
- Martin Jung,
- Lucille Pourcel,
- Wolf Reik,
- Dominique Gauguier,
- Gilles Vergnaud,
- and Christine Pourcel
Genome Res. March 1, 2001 11: 382-388; doi:10.1101/gr.163801
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Comparative DNA Sequence Analysis of Mouse and Human Protocadherin Gene Clusters
- Qiang Wu,
- Theresa Zhang,
- Jan-Fang Cheng,
- Youngwook Kim,
- Jane Grimwood,
- Jeremy Schmutz,
- Mark Dickson,
- James P. Noonan,
- Michael Q. Zhang,
- Richard M. Myers,
- and Tom Maniatis
Genome Res. March 1, 2001 11: 389-404; doi:10.1101/gr.167301
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Microchip Module for Blood Sample Preparation and Nucleic Acid Amplification Reactions
- Po Ki Yuen,
- Larry J. Kricka,
- Paolo Fortina,
- Nicholas J. Panaro,
- Taku Sakazume,
- and Peter Wilding
Genome Res. March 1, 2001 11: 405-412; doi:10.1101/gr.155301
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High-Performance Multiplex SNP Analysis of Three Hemochromatosis-Related Mutations With Capillary Array Electrophoresis Microplates
- Igor Medintz,
- Wendy W. Wong,
- Lorenzo Berti,
- Lawrence Shiow,
- Jennifer Tom,
- James Scherer,
- George Sensabaugh,
- and Richard A. Mathies
Genome Res. March 1, 2001 11: 413-421; doi:10.1101/gr.164701

METHODS

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Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs
- Stefan Wiemann,
- Bernd Weil,
- Ruth Wellenreuther,
- Johannes Gassenhuber,
- Sabine Glassl,
- Wilhelm Ansorge,
- Michael Böcher,
- Helmut Blöcker,
- Stefan Bauersachs,
- Helmut Blum,
- Jürgen Lauber,
- Andreas Düsterhöft,
- Andreas Beyer,
- Karl Köhrer,
- Normann Strack,
- Hans-Werner Mewes,
- Birgit Ottenwälder,
- Brigitte Obermaier,
- Jens Tampe,
- Dagmar Heubner,
- Rolf Wambutt,
- Bernhard Korn,
- Michaela Klein,
- and Annemarie Poustka
Genome Res. March 1, 2001 11: 422-435; Published in Advance February 8, 2001, doi:10.1101/gr.154701
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Fluorescence Polarization in Homogeneous Nucleic Acid Analysis II: 5′-Nuclease Assay
- Sherif Latif,
- Irma Bauer-Sardina,
- Kostubh Ranade,
- Kenneth J. Livak,
- and Pui-Yan Kwok
Genome Res. March 1, 2001 11: 436-440; doi:10.1101/gr.156601
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A Method For Parallel, Automated, Thermal Cycling of Submicroliter Samples
- Jonathan Nakane,
- David Broemeling,
- Roger Donaldson,
- Andre Marziali,
- Thomas D. Willis,
- Matthew O'Keefe,
- and Ronald W. Davis
Genome Res. March 1, 2001 11: 441-447; Published in Advance February 8, 2001, doi:10.1101/gr.164401
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A Novel Chromatin Immunoprecipitation and Array (CIA) Analysis Identifies a 460-kb CENP-A-Binding Neocentromere DNA
- Anthony W.I. Lo,
- Dianna J. Magliano,
- Mandy C. Sibson,
- Paul Kalitsis,
- Jeffrey M. Craig,
- and K.H. Andy Choo
Genome Res. March 1, 2001 11: 448-457; Published in Advance February 8, 2001, doi:10.1101/gr.167601
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A Combinatorial Partitioning Method to Identify Multilocus Genotypic Partitions That Predict Quantitative Trait Variation
- M.R. Nelson,
- S.L.R. Kardia,
- R.E. Ferrell,
- and C.F. Sing
Genome Res. March 1, 2001 11: 458-470; doi:10.1101/gr.172901
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Y-Chromosomal SNPs in Finno–Ugric-Speaking Populations Analyzed by Minisequencing on Microarrays
- Mirja Raitio,
- Katarina Lindroos,
- Minna Laukkanen,
- Tomi Pastinen,
- Pertti Sistonen,
- Antti Sajantila,
- and Ann-Christine Syvänen
Genome Res. March 1, 2001 11: 471-482; doi:10.1101/gr.156301

RESOURCES

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A Bacterial Artificial Chromosome Library for Sequencing the Complete Human Genome
- Kazutoyo Osoegawa,
- Aaron G. Mammoser,
- Chenyan Wu,
- Eirik Frengen,
- Changjiang Zeng,
- Joseph J. Catanese,
- and Pieter J. de Jong
Genome Res. March 1, 2001 11: 483-496; doi:10.1101/gr.169601
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Generation of a High-Density Rat EST Map
- Todd E. Scheetz,
- Michael R. Raymond,
- Darryl Y. Nishimura,
- Ann McClain,
- Chad Roberts,
- Clay Birkett,
- Jack Gardiner,
- Jie Zhang,
- Nichole Butters,
- Christine Sun,
- Anne Kwitek-Black,
- Howard Jacob,
- Thomas L. Casavant,
- M. Bento Soares,
- and Val C. Sheffield
Genome Res. March 1, 2001 11: 497-502; Published in Advance February 8, 2001, doi:10.1101/gr.151601

ERRATUM

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Errata for vol. 11, p. 208
Genome Res. March 1, 2001 11: 503

COMMENTARIES

Life with 25,000 Genes

Genomics in Latin America: Reaching the Frontiers

PERSPECTIVE

Using Mouse Genetics to Understand Infectious Disease Pathogenesis

REPORTS

First Pass Annotation of Promoters on Human Chromosome 22

Identification of Human Epidermal Differentiation Complex (EDC)-Encoded Genes by Subtractive Hybridization of Entire YACs to a Gridded Keratinocyte cDNA Library

ARTICLE

Genome Alignment, Evolution of Prokaryotic Genome Organization, and Prediction of Gene Function Using Genomic Context

LETTERS

Gene Duplication and the Structure of Eukaryotic Genomes

A Dominant Modifier of Transgene Methylation Is Mapped by QTL Analysis to Mouse Chromosome 13

Comparative DNA Sequence Analysis of Mouse and Human Protocadherin Gene Clusters

Microchip Module for Blood Sample Preparation and Nucleic Acid Amplification Reactions

High-Performance Multiplex SNP Analysis of Three Hemochromatosis-Related Mutations With Capillary Array Electrophoresis Microplates

METHODS

Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs

Fluorescence Polarization in Homogeneous Nucleic Acid Analysis II: 5′-Nuclease Assay

A Method For Parallel, Automated, Thermal Cycling of Submicroliter Samples

A Novel Chromatin Immunoprecipitation and Array (CIA) Analysis Identifies a 460-kb CENP-A-Binding Neocentromere DNA

A Combinatorial Partitioning Method to Identify Multilocus Genotypic Partitions That Predict Quantitative Trait Variation

Y-Chromosomal SNPs in Finno–Ugric-Speaking Populations Analyzed by Minisequencing on Microarrays

RESOURCES

A Bacterial Artificial Chromosome Library for Sequencing the Complete Human Genome

Generation of a High-Density Rat EST Map

ERRATUM

Errata for vol. 11, p. 208

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