Conservation, Regulation, Synteny, and Introns in a Large-scale C. briggsae–C. elegans Genomic Alignment

Table 9.

Percent Homology Between 3′ and 5′ Splice Sites

A 22 33 30 26 38 30 39 38 23 30 82 88 ^ 49 37 39 18 20 38 31 30 14 30 37 16
B 24 32 30 24 27 31 28 34 35 20 63 76 ^ 46 41 31 25 17 25 20 24 28 27 26 25
C 26 27 27 27 29 29 28 31 27 23 56 60 ^ 31 36 27 27 21 25 25 26 26 25 26 26

  • The table shows the average percent of matching bases for 12 nucleotides on either side of the splice site, which is shown by the caret (^). (A) Introns unique to C. briggsae; (B) introns unique to C. elegans; (C) all C. elegans introns.

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  1. Genome Res. 10: 1115-1125

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