Conservation, Regulation, Synteny, and Introns in a Large-scale C. briggsae–C. elegans Genomic Alignment

Table 6.

Summary of Insertions and Introns Unique to One Species

11189 total inserts of length >32
6845 C. elegansinserts
4344 C. briggsaeinserts
10686 inserts in regions of weak homology
503 inserts in regions of strong homology
4644 inserts in intergenic regions
4517 inserts in intron regions
1508 inserts in coding regions
518 inserts with one end in an intron and the other in  an exon
2 inserts with one end in a gene and one end  intergenic
301 inserts with GT…AG ends in regions of strong  homology
362 inserts in coding regions with strong homology
170 introns unique to C. elegans
93 introns unique to C. briggsae
263 total introns unique to either species
  • An intron unique to one species is defined here as an insert of length >32 in a highly conserved coding region that aligns optimally with GT … AG ends.

This Article

  1. Genome Res. 10: 1115-1125

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