Parking Strategies for Genome Sequencing

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 6.
Figure 6.

Overlap inefficiency of parking. Overlap inefficiency is the ratio of the sum of the lengths of the clones sequenced to the length of unique target sequence produced. There is no such inefficiency for strict parking with no allowed overlap (φ = 0). Overlap inefficiency and coverage are parametrically related as functions of time ν; the resulting curves do not extend beyond their respective jamming limits. The curve for φ = 1 corresponds to the Clarke-Carbon equation.

This Article

  1. Genome Res. 10: 1020-1030

Preprint Server