Multiple LTR-Retrotransposon Families in the Asexual Yeast Candida albicans

Table 2.

Related Families of LTRs

Related LTRs Percent identity Alignment length (bp)
alpha, san, xi 62 (a/s) 408
61 (a/x) 404
62 (s/x) 412
lambda, zeta 57 449
omega, mu 58 453
nu, iota 57  209
omicron, pi, rho 65 (o/p) 144
58 (o/r) 251
60 (p/r) 244
chi, phi 67 204
eta, epsilon 57 491
whio, tara, titi 61 (w/ta) 203
59 (w/ti) 256
60 (ta/ti) 245
moa, episemon 58 374
sampi, theta 62 267
  • Between representative elements of each family.

  • In many cases this is not a full-length alignment.

  • These two groups appear to be loosely associated as well.

This Article

  1. Genome Res. 10: 174-191

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