Comparative Genome Analysis of the Mouse Imprinted Gene Impact and Its Nonimprinted Human Homolog IMPACT: Toward the Structural Basis for Species-Specific Imprinting

Table 1.

Aligned Exon–Intron Organizations of Mouse Impact and Human IMPACT

Gene Exon Size (bp) 5′ Splice donor Intron Size (bp) 3′ Splice acceptor
Impact 1 121 AGCCAGAGGCAGgtaaggtccc … 1 2147 … caactttcagAGTGAAGAAATC
IMPACT 1 75 GACCAGAGGCAGgtgaggcccc … 1 1126 … tttctttcagAATGAGGAAATT
Impact 2 129 CTTTGTTTACAGgtaacttata … 2 1121 … ttctttgtagGTGATGTTGCCA
IMPACT 2 129 CTTTGCTTGCAGgtactttttc … 2 821 … tgcattgtagGTGATGCTGCCG
Impact 3 53 TATCAGCTGAAgtaagctttg … 3 434 … tcaatcttagCGCTCCCTGG
IMPACT 3 53 TACCAGTTGAAgtaagctgta … 3 1400 … ttaatcttagTGCTCCTTGG
Impact 4 63 GAGATATATGTgtaagtgaca … 4 5802 … ttttgtttagCCACAACATG
IMPACT 4 63 GAAATATATATgtaagtgaca … 4 7565 … ttttgtttagTCAGAATATC
Impact 5 86 ACCGAGCCAGgtgagagtga … 5 2060 … ttttacatagACCCAGATGTC
IMPACT 5 86 ACAGAACCAGgtaggattga … 5 2454 … attcacatagGCCAGATGTA
Impact 6 126 ACTCAACCAGgtattgtgtt … 6 834 … gactttatagAAACT
IMPACT 6 123 ACAGgtataatgtt … 6 2429 … acatttctagAAGTAGAAGTA
Impact 7 98 TGTCCTGAGCAGgtgcgtgacc … 7 1006 … gtttttgaagGTGAAACTGGTT
IMPACT 7 104 TGTCCCAAACAGgtaaagttcc … 7 2240 … tgtttttaagGTGAAAATGGTT
Impact 8 74 TATGCCTACAGgtgagtgact … 8 1874 … gtgtttccagGATATTCTGT
IMPACT 8 74 TATGCCTACAGgtgagtaatc … 8 2626 … gtatttgcagAATATATTGT
Impact 9 91 CACCTCATGGAGgtgagtgtag … 9 1349 … aaaataatagATTTTGAATGTG
IMPACT 9 91 CATCTCATGGAGgtaggtgtaa … 9 1635 … aaaataacagATTTTGAATGTG
Impact 10 135 ACGAACACTCCTgtgagtcttg … 10 613 … tctcttccagGACGAGTCAACT
IMPACT 10 135 ACAAATTCACCTgtaagtggct … 10 825 … tctttttcagGAGGAGTCATCT
Impact 11 2462
IMPACT 11 2749

This Article

  1. Genome Res. 10: 1878-1889

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