Novel long-read sequencing data approaches
- Visualization and analysis of medically relevant tandem repeats in nanopore sequencing of control cohorts with pathSTR
- Telomere-to-telomere assembly by preserving contained reads
- Gapless assembly of complete human and plant chromosomes using only nanopore sequencing
- Full-resolution HLA and KIR gene annotations for human genome assemblies
- Characterizing tandem repeat complexities across long-read sequencing platforms with TREAT and otter
- Measuring X-Chromosome inactivation skew for X-linked diseases with adaptive nanopore sequencing
- An optimized protocol for quality control of gene therapy vectors using nanopore direct RNA sequencing
- DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools
- Detecting m6A RNA modification from nanopore sequencing using a semisupervised learning framework
- Long-read subcellular fractionation and sequencing reveals the translational fate of full-length mRNA isoforms during neuronal differentiation
- Long-read Ribo-STAMP simultaneously measures transcription and translation with isoform resolution
