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Research

Nucleotide composition-linked divergence of vertebrate core promoter architecture

  • First Published January 10, 2011
Resource

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

  • First Published January 6, 2011
Resource

Adaptive seeds tame genomic sequence comparison

  • First Published January 5, 2011
Erratum

Erratum

  • First Published January 4, 2011
Research

Observation and prediction of recurrent human translocations mediated by NAHR between nonhomologous chromosomes

  • First Published January 4, 2011
Research

Developmental control of the DNA replication and transcription programs

  • First Published December 22, 2010
Research

C. elegans trans-splicing" > A global analysis of C. elegans trans-splicing

  • First Published December 22, 2010
Resource

Drosophila melanogaster transcriptome by paired-end RNA sequencing" > The Drosophila melanogaster transcriptome by paired-end RNA sequencing

  • First Published December 22, 2010
Method

Drosophila melanogaster and Caenorhabditis elegans" > Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans

  • First Published December 22, 2010
Research

Drosophila melanogaster" > Genome-wide analysis of promoter architecture in Drosophila melanogaster

  • First Published December 22, 2010
Resource

Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines

  • First Published December 22, 2010
Research

C. elegans" > Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans

  • First Published December 22, 2010
Research

C. elegans" > Broad chromosomal domains of histone modification patterns in C. elegans

  • First Published December 22, 2010
Research

C. elegans" > High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans

  • First Published December 22, 2010
Resource

Caenorhabditis elegans" > Genome-wide analysis of alternative splicing in Caenorhabditis elegans

  • First Published December 22, 2010
Research

Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence" > Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence

  • First Published December 22, 2010
Resource

C. elegans gene expression" > A spatial and temporal map of C. elegans gene expression

  • First Published December 22, 2010
Research

Polycomb preferentially targets stalled promoters of coding and noncoding transcripts

  • First Published December 22, 2010
Method

C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data" > Prediction and characterization of noncoding RNAs in C. elegans by integrating conservation, secondary structure, and high-throughput sequencing and array data

  • First Published December 22, 2010
Research

Drosophila heterochromatin" > Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin

  • First Published December 22, 2010
Research

Drosophila replication program" > Chromatin signatures of the Drosophila replication program

  • First Published December 22, 2010
Research

RNA sequencing reveals the role of splicing polymorphisms in regulating human gene expression

  • First Published December 20, 2010
Method

Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I–induced DNA damage

  • First Published December 20, 2010
Research

Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription

  • First Published December 20, 2010
Research

Interactome mapping suggests new mechanistic details underlying Alzheimer's disease

  • First Published December 16, 2010
Research

Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation

  • First Published December 16, 2010
Research

Epigenetic suppression of the TGF-beta pathway revealed by transcriptome profiling in ovarian cancer

  • First Published December 14, 2010
Research

LSH and G9a/GLP complex are required for developmentally programmed DNA methylation

  • First Published December 13, 2010
Research

Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time

  • First Published December 13, 2010
Research

Copy number and targeted mutational analysis reveals novel somatic events in metastatic prostate tumors

  • First Published December 8, 2010
Research

cis- and trans-regulatory variation modulating microRNA expression levels in human fibroblasts" > Identification of cis- and trans-regulatory variation modulating microRNA expression levels in human fibroblasts

  • First Published December 8, 2010
Research

High-throughput sequencing of complete human mtDNA genomes from the Philippines

  • First Published December 8, 2010
Research

Alu repeat discovery and characterization within human genomes" > Alu repeat discovery and characterization within human genomes

  • First Published December 3, 2010
Erratum

Erratum

  • First Published December 1, 2010
Reviewer Index

Reviewer Index, Volume 20, 2010

  • First Published December 1, 2010
Author Index

Author Index, Volume 20, 2010

  • First Published December 1, 2010
Method

High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

  • First Published November 24, 2010
Method

Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data

  • First Published November 24, 2010
Research

Tissue-specific disallowance of housekeeping genes: The other face of cell differentiation

  • First Published November 18, 2010
Research

Copy number variation modifies expression time courses

  • First Published November 17, 2010
Method

Genome-wide characterization of centromeric satellites from multiple mammalian genomes

  • First Published November 16, 2010
Research

AK005651) and contributes to type 1 diabetes susceptibility" > A recombination hotspot leads to sequence variability within a novel gene (AK005651) and contributes to type 1 diabetes susceptibility

  • First Published November 4, 2010
Method

Gene expression profiling of human breast tissue samples using SAGE-Seq

  • First Published November 2, 2010
Method

Evaluation of affinity-based genome-wide DNA methylation data: Effects of CpG density, amplification bias, and copy number variation

  • First Published November 2, 2010
Research

Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome

  • First Published November 2, 2010
Method

High-throughput discovery of rare insertions and deletions in large cohorts

  • First Published November 1, 2010
Perspective

Transgenerational epigenetic inheritance: More questions than answers

  • First Published November 1, 2010
Research

Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing

  • First Published October 29, 2010
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