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Method

Amplification and thrifty single-molecule sequencing of recurrent somatic structural variations

  • First Published December 4, 2013
Method

From single-cell to cell-pool transcriptomes: Stochasticity in gene expression and RNA splicing

  • First Published December 3, 2013
Method

Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome

  • First Published December 3, 2013
Research

Independent RNA polymerase II preinitiation complex dynamics and nucleosome turnover at promoter sites in vivo

  • First Published December 2, 2013
Reviewer Index

Reviewer Index, Volume 23, 2013

  • First Published December 2, 2013
Author Index

Author Index, Volume 23, 2013

  • First Published December 2, 2013
Research

Canonical nucleosome organization at promoters forms during genome activation

  • First Published November 27, 2013
Method

cis-regulatory landscapes in vertebrates" > A mobile insulator system to detect and disrupt cis-regulatory landscapes in vertebrates

  • First Published November 25, 2013
Research

Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia

  • First Published November 21, 2013
Method

Highly efficient gene knockout in mice and zebrafish with RNA-guided endonucleases

  • First Published November 19, 2013
Method

Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases

  • First Published November 19, 2013
Research

The genetic basis for individual differences in mRNA splicing and APOBEC1 editing activity in murine macrophages

  • First Published November 18, 2013
Research

Genomic and transcriptomic plasticity in treatment-naïve ovarian cancer

  • First Published November 12, 2013
Method

Discovery of recurrent structural variants in nasopharyngeal carcinoma

  • First Published November 8, 2013
Research

Genome-wide analysis of HPV integration in human cancers reveals recurrent, focal genomic instability

  • First Published November 7, 2013
Research

Combinatorial effects of multiple enhancer variants in linkage disequilibrium dictate levels of gene expression to confer susceptibility to common traits

  • First Published November 6, 2013
Method

Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair

  • First Published October 31, 2013
Method

Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing

  • First Published October 31, 2013
Perspective

Functional transcriptomics in the post-ENCODE era

  • First Published October 30, 2013
Resource

Integrating and mining the chromatin landscape of cell-type specificity using self-organizing maps

  • First Published October 29, 2013
Method

A unified model for yeast transcript definition

  • First Published October 29, 2013
Research

The altered landscape of the human skin microbiome in patients with primary immunodeficiencies

  • First Published October 29, 2013
Resource

Variation Ontology for annotation of variation effects and mechanisms

  • First Published October 25, 2013
Resource

Improved exome prioritization of disease genes through cross-species phenotype comparison

  • First Published October 25, 2013
Research

Variation in chromatin accessibility in human kidney cancer links H3K36 methyltransferase loss with widespread RNA processing defects

  • First Published October 24, 2013
Resource

Genome-wide high resolution parental-specific DNA and histone methylation maps uncover patterns of imprinting regulation in maize

  • First Published October 16, 2013
Research

Gene duplication and neofunctionalization: POLR3G and POLR3GL

  • First Published October 9, 2013
Method

Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma

  • First Published October 8, 2013
Research

Maize centromeres expand and adopt a uniform size in the genetic background of oat

  • First Published October 7, 2013
Research

Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

  • First Published October 3, 2013
Research

A systems level predictive model for global gene regulation of methanogenesis in a hydrogenotrophic methanogen

  • First Published October 2, 2013
Research

Hominoid fission of chromosome 14/15 and the role of segmental duplications

  • First Published September 27, 2013
Research

High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome

  • First Published September 27, 2013
Research

The evolution of evolvability in microRNA target sites in vertebrates

  • First Published September 27, 2013
Research

3′ UTR-isoform choice has limited influence on the stability and translational efficiency of most mRNAs in mouse fibroblasts

  • First Published September 26, 2013
Research

Large-scale hypomethylated blocks associated with Epstein-Barr virus–induced B-cell immortalization

  • First Published September 25, 2013
Research

Random replication of the inactive X chromosome

  • First Published September 24, 2013
Research

Monodelphis domestica" > Chromosome-wide profiling of X-chromosome inactivation and epigenetic states in fetal brain and placenta of the opossum, Monodelphis domestica

  • First Published September 24, 2013
Research

Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements" > Small RNA profiling of Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements

  • First Published September 24, 2013
Method

Single-cell mutational profiling and clonal phylogeny in cancer

  • First Published September 20, 2013
Research

Heliconius butterflies" > Genome-wide evidence for speciation with gene flow in Heliconius butterflies

  • First Published September 17, 2013
Research

Derived variants at six genes explain nearly half of size reduction in dog breeds

  • First Published September 11, 2013
Research

Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division

  • First Published September 11, 2013
Research

Alu elements during B-cell activation" > DNA methylation profiling in human B cells reveals immune regulatory elements and epigenetic plasticity at Alu elements during B-cell activation

  • First Published September 6, 2013
Research

Identifying multiple causative genes at a single GWAS locus

  • First Published September 4, 2013
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