Your search for returned 6,373 results
Letter
Functional diversity for REST (NRSF) is defined by in vivo binding affinity hierarchies at the DNA sequence level
- First Published April 28, 2009
Letter
SMAD7 expression" > The colorectal cancer risk at 18q21 is caused by a novel variant altering SMAD7 expression
- First Published April 24, 2009
Letter
Lack of bystander activation shows that localization exterior to chromosome territories is not sufficient to up-regulate gene expression
- First Published April 23, 2009
Next-Generation DNA Sequencing/Review
Microbial community profiling for human microbiome projects: Tools, techniques, and challenges
- First Published April 21, 2009
Resource
High resolution mapping of expression QTLs in heterogeneous stock mice in multiple tissues
- First Published April 17, 2009
Letter
Comparative inference of illegitimate recombination between rice and sorghum duplicated genes produced by polyploidization
- First Published April 16, 2009
Letter
Dynamic reprogramming of transcription factors to and from the subtelomere
- First Published April 16, 2009
Letter
Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories
- First Published April 2, 2009
Next-Generation DNA Sequencing/Review
Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses
- First Published April 1, 2009
Letter
New class of microRNA targets containing simultaneous 5′-UTR and 3′-UTR interaction sites
- First Published March 31, 2009
Letter
Signals of recent positive selection in a worldwide sample of human populations
- First Published March 23, 2009
Letter
Campylobacter" > Pervasive, genome-wide positive selection leading to functional divergence in the bacterial genus Campylobacter
- First Published March 20, 2009
Letter
The apolipoprotein L family of programmed cell death and immunity genes rapidly evolved in primates at discrete sites of host–pathogen interactions
- First Published March 19, 2009
Letter
Darwinian and demographic forces affecting human protein coding genes
- First Published March 11, 2009
Methods
Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver
- First Published March 9, 2009
Next-Generation DNA Sequencing/Review
Finding the fifth base: Genome-wide sequencing of cytosine methylation
- First Published March 9, 2009
Letter
Geographical structure and differential natural selection among North European populations
- First Published March 5, 2009
Methods
Integrating siRNA and protein–protein interaction data to identify an expanded insulin signaling network
- First Published March 4, 2009
Letter
Genomic distribution of CHD7 on chromatin tracks H3K4 methylation patterns
- First Published February 27, 2009
Letter
Drosophila genus" > General gene movement off the X chromosome in the Drosophila genus
- First Published February 27, 2009
Letter
Comparative analysis of H2A.Z nucleosome organization in the human and yeast genomes
- First Published February 26, 2009
Resource
Global networks of functional coupling in eukaryotes from comprehensive data integration
- First Published February 25, 2009
Methods
Single-pass classification of all noncoding sequences in a bacterial genome using phylogenetic profiles
- First Published February 23, 2009
Letter
Genomic mapping of binding regions for the Ecdysone receptor protein complex
- First Published February 23, 2009
Letter
The impact of genomic neighborhood on the evolution of human and chimpanzee transcriptome
- First Published February 19, 2009
Methods
Dissecting transcription regulatory pathways through a new bacterial one-hybrid reporter system
- First Published February 18, 2009
Letter
Hox gene clusters of the green anole lizard" > Atypical relaxation of structural constraints in Hox gene clusters of the green anole lizard
- First Published February 18, 2009
Resource
HistoneHits: A database for histone mutations and their phenotypes
- First Published February 13, 2009
Letter
Global distribution of genomic diversity underscores rich complex history of continental human populations
- First Published February 13, 2009
Letter
Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA
- First Published February 10, 2009
Letter
mtDNA mutation pattern in tumors and human evolution are shaped by similar selective constraints
- First Published February 10, 2009
Letter
The dynamic DNA methylomes of double-stranded DNA viruses associated with human cancer
- First Published February 10, 2009
Methods
Detecting heterozygosity in shotgun genome assemblies: Lessons from obligately outcrossing nematodes
- First Published February 9, 2009
Letter
Histone H3.3 incorporation provides a unique and functionally essential telomeric chromatin in embryonic stem cells
- First Published February 5, 2009
Letter
Anopheles funestus, a major malaria vector" > Two duplicated P450 genes are associated with pyrethroid resistance in Anopheles funestus, a major malaria vector
- First Published February 5, 2009
Letter
Callorhinchus milii" > Into the blue: Gene duplication and loss underlie color vision adaptations in a deep-sea chimaera, the elephant shark Callorhinchus milii
- First Published February 4, 2009
Resource
C. elegans" > Massively parallel sequencing of the polyadenylated transcriptome of C. elegans
- First Published January 30, 2009
Letter
The functional importance of telomere clustering: Global changes in gene expression result from SIR factor dispersion
- First Published January 29, 2009
Resource
Multiple whole-genome alignments without a reference organism
- First Published January 28, 2009
Article
High-resolution DNA-binding specificity analysis of yeast transcription factors
- First Published January 21, 2009
Letter
HapMap methylation-associated SNPs, markers of germline DNA methylation, positively correlate with regional levels of human meiotic recombination
- First Published January 21, 2009
Article
Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing
- First Published January 13, 2009
Methods
A transcription factor affinity-based code for mammalian transcription initiation
- First Published January 13, 2009
LETTER
Drosophila genomes" > Network-level molecular evolutionary analysis of the insulin/TOR signal transduction pathway across 12 Drosophila genomes
- First Published January 13, 2009
Methods
Genomic copy number determination in cancer cells from single nucleotide polymorphism microarrays based on quantitative genotyping corrected for aneuploidy
- First Published January 13, 2009
LETTER
Thylacinus cynocephalus)" > The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)
- First Published January 12, 2009
Resource
The genomic architecture of segmental duplications and associated copy number variants in dogs
- First Published January 7, 2009
Letter
Cell-type selective chromatin remodeling defines the active subset of FOXA1-bound enhancers
- First Published January 7, 2009
Article
Saccharomyces genome" > A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome
- First Published January 5, 2009
Letter
Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts
- First Published December 30, 2008
Article
MEN ε/β nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles" > MEN ε/β nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles
- First Published December 22, 2008
Letter
Neurospora crassa" > Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa
- First Published December 17, 2008
Resource
MicroRNA target prediction by expression analysis of host genes
- First Published December 16, 2008
Resource
A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate
- First Published December 16, 2008
Methods
Genome-wide profiling of salt fractions maps physical properties of chromatin
- First Published December 16, 2008
Methods
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE
- First Published December 11, 2008
RESOURCE
De novo fragment assembly with short mate-paired reads: Does the read length matter?
- First Published December 3, 2008
LETTER
A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome
- First Published December 3, 2008
LETTER
Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains
- First Published December 3, 2008
LETTER
H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome
- First Published December 1, 2008
LETTER
Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: New functional implications for MITEs
- First Published November 26, 2008
RESOURCE
Dissecting the effects of mtDNA variations on complex traits using mouse conplastic strains
- First Published November 26, 2008
Methods
MSB: A mean-shift-based approach for the analysis of structural variation in the genome
- First Published November 26, 2008
LETTER
Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites
- First Published November 24, 2008
RESOURCE
EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
- First Published November 24, 2008
LETTER
Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome
- First Published November 24, 2008
Methods
Pseudomonas syringae pv. oryzae" > De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae
- First Published November 17, 2008
Methods
A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements
- First Published November 17, 2008
LETTER
Chromosomal instability mediated by non-B DNA: Cruciform conformation and not DNA sequence is responsible for recurrent translocation in humans
- First Published November 7, 2008
ARTICLE
Allele-specific gene expression patterns in primary leukemic cells reveal regulation of gene expression by CpG site methylation
- First Published November 7, 2008
LETTER
Arabidopsis differentiation and stress responses" > Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses
- First Published November 7, 2008
Methods
High-resolution human core-promoter prediction with CoreBoost_HM
- First Published November 7, 2008
LETTER
Widespread balancing selection and pathogen-driven selection at blood group antigen genes
- First Published November 7, 2008
RESOURCE
Caenorhabditis elegans microRNA promoter activity" > Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity
- First Published November 3, 2008
LETTER
Characterization of the bovine pseudoautosomal boundary: Documenting the evolutionary history of mammalian sex chromosomes
- First Published November 3, 2008
Methods
Hox cis-regulatory elements" > Multigenome DNA sequence conservation identifies Hox cis-regulatory elements
- First Published November 3, 2008
Forum
Don’t throw the baby out with the bathwater: Enabling a bottom-up approach in genome-wide association studies
- First Published October 30, 2008
REVIEW
Defensins and the dynamic genome: What we can learn from structural variation at human chromosome band 8p23.1
- First Published October 30, 2008
LETTER
Oryza sativa" > Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa
- First Published October 29, 2008