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Resource

Charting the regulatory landscape of TP53 on transposable elements in cancer

Xuan Qu
Yonghao Liang
Colin McCornack
Xiaoyun Xing
Heather Schmidt
Chad Tomlinson
... [+1 authors] ...,
Catrina Fronick
Edward A. Belter
Juan F. Macias-Velasco
Ting Wang

First Published May 13, 2025

Resource

Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution

Yujie Chen
Yiran Hou
Qinglin Zeng
Irene Wang
Meiru Shang
Kwangdeok Shin Christopher Hemauer
... [+2 authors] ...,
Xiaoyun Xing
Junsu Kang
Guoyan Zhao
Ting Wang

First Published January 14, 2025

Method

Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm

Bo Zhang
Yan Zhou
Nan Lin
Rebecca F. Lowdon
Chibo Hong
Raman P. Nagarajan Jeffrey B. Cheng Daofeng Li Michael Stevens Hyung Joo Lee Xiaoyun Xing Jia Zhou Vasavi Sundaram GiNell Elliott Junchen Gu Taoping Shi Philippe Gascard Mahvash Sigaroudinia Thea D. Tlsty Theresa Kadlecek Arthur Weiss Henriette O’Geen Peggy J. Farnham Cécile L. Maire Keith L. Ligon Pamela A.F. Madden Angela Tam Richard Moore Martin Hirst
... [+24 authors] ...,
Marco A. Marra
Baoxue Zhang
Joseph F. Costello
Ting Wang

First Published June 26, 2013

LETTER

Computational identification and functional validation of regulatory motifs in cartilage-expressed genes

Sherri R. Davies
Li-Wei Chang
Debabrata Patra
Xiaoyun Xing
Karen Posey
Jacqueline Hecht
Gary D. Stormo
Linda J. Sandell

First Published September 4, 2007