Search | Genome Research

Your search for returned 37 results

Method

OMKar automates genome karyotyping using optical maps to identify constitutional abnormalities

Siavash Raeisi Dehkordi
Zhaoyang Jia
Joey Estabrook
Jen Hauenstein
Neil Miller
Naz Güleray-Lafci Jürgen Neesen Alex Hastie
... [+3 authors] ...,
Alka Chaubey
Andy Wing Chun Pang
Paul Dremsek
Vineet Bafna

First Published November 14, 2025

Research

3C sites in poly(A) RNA" > Nanopore direct RNA sequencing reveals METTL2A-mediated m³C sites in poly(A) RNA

Shuhei Mitsutomi
Anzu Sugawara
Masahide Seki
Yutaka Suzuki
Sotaro Miyao
Haozhe Du
... [+1 authors] ...,
Kenji Takahashi
Yusuke Mizukami
Kenzui Taniue
Nobuyoshi Akimitsu

First Published October 30, 2025

Method

CoRAL accurately resolves extrachromosomal DNA genome structures with long-read sequencing

Kaiyuan Zhu
Matthew G. Jones
Jens Luebeck
Xinxin Bu
Hyerim Yi
King L. Hung Ivy Tsz-Lo Wong
... [+2 authors] ...,
Shu Zhang
Paul S. Mischel
Howard Y. Chang
Vineet Bafna

First Published July 9, 2024

Method

Bombyx mori" > High-throughput and genome-scale targeted mutagenesis using CRISPR in a nonmodel multicellular organism, Bombyx mori

Sanyuan Ma
Tong Zhang
Ruolin Wang
Pan Wang
Yue Liu
Jiasong Chang Aoming Wang Xinhui Lan Le Sun Hao Sun Run Shi Wei Lu Dan Liu Na Zhang Wenbo Hu
... [+10 authors] ...,
Xiaogang Wang
Weiqing Xing
Ling Jia
Qingyou Xia

First Published January 8, 2024

Research

Positive selective sweeps of epigenetic mutations regulating specialized metabolites in plants

Kazumasa Shirai
Mitsuhiko P. Sato
Ranko Nishi
Masahide Seki
Yutaka Suzuki
Kousuke Hanada

First Published May 18, 2021

Research

Long-read sequencing for non-small-cell lung cancer genomes

Yoshitaka Sakamoto
Liu Xu
Masahide Seki
Toshiyuki T. Yokoyama
Masahiro Kasahara
Yukie Kashima Akihiro Ohashi Yoko Shimada Noriko Motoi Katsuya Tsuchihara Susumu S. Kobayashi
... [+6 authors] ...,
Takashi Kohno
Yuichi Shiraishi
Ayako Suzuki
Yutaka Suzuki

First Published September 4, 2020

Method

Metabolic labeling of RNA using multiple ribonucleoside analogs enables the simultaneous evaluation of RNA synthesis and degradation rates

Kentaro Kawata
Hiroyasu Wakida
Toshimichi Yamada
Kenzui Taniue
Han Han
Masahide Seki
Yutaka Suzuki
Nobuyoshi Akimitsu

First Published August 25, 2020

Method

Bombyx mori" > Genome-wide CRISPR screening reveals genes essential for cell viability and resistance to abiotic and biotic stresses in Bombyx mori

Jiasong Chang
Ruolin Wang
Kai Yu
Tong Zhang
Xiaoxu Chen
Yue Liu
... [+1 authors] ...,
Run Shi
Xiaogang Wang
Qingyou Xia
Sanyuan Ma

First Published May 18, 2020

Method

Targeted genotyping of variable number tandem repeats with adVNTR

Mehrdad Bakhtiari
Sharona Shleizer-Burko
Melissa Gymrek
Vikas Bansal
Vineet Bafna

First Published October 23, 2018

Research

Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes

Vedran Franke
Sravya Ganesh
Rosa Karlic
Radek Malik
Josef Pasulka
Filip Horvat Maja Kuzman Helena Fulka Marketa Cernohorska Jana Urbanova Eliska Svobodova Jun Ma Yutaka Suzuki
... [+8 authors] ...,
Fugaku Aoki
Richard M. Schultz
Kristian Vlahovicek
Petr Svoboda

First Published May 18, 2017

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