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Method

Proteome-wide discovery of mislocated proteins in cancer

  • KiYoung Lee
  • Kyunghee Byun
  • Wonpyo Hong
  • Han-Yu Chuang
  • Chan-Gi Pack
  • Enkhjargal Bayarsaikhan Sun Ha Paek
  • ... [+2 authors] ...,
  • Hyosil Kim
  • Hye Young Shin
  • Trey Ideker
  • Bonghee Lee
  • First Published May 14, 2013
Research

trans and cis mutations" > Coevolution within a transcriptional network by compensatory trans and cis mutations

  • Dwight Kuo
  • Katherine Licon
  • Sourav Bandyopadhyay
  • Ryan Chuang
  • Colin Luo
  • Justin Catalana
  • Timothy Ravasi
  • Kai Tan
  • Trey Ideker
  • First Published October 26, 2010
Letter

Bayesian network analysis of targeting interactions in chromatin

  • Bas van Steensel
  • Ulrich Braunschweig
  • Guillaume J. Filion
  • Menzies Chen
  • Joke G. van Bemmel
  • Trey Ideker
  • First Published December 9, 2009
Letter

Dynamic reprogramming of transcription factors to and from the subtelomere

  • H. Craig Mak
  • Lorraine Pillus
  • Trey Ideker
  • First Published April 16, 2009
RECOMB Special/Review

Protein networks in disease

  • Trey Ideker
  • Roded Sharan
  • First Published April 1, 2008
Methods

Systematic identification of functional orthologs based on protein network comparison

  • Sourav Bandyopadhyay
  • Roded Sharan
  • Trey Ideker
  • First Published April 4, 2006
RESOURCE

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

  • Paul Shannon
  • Andrew Markiel
  • Owen Ozier
  • Nitin S. Baliga
  • Jonathan T. Wang
  • Daniel Ramage
  • Nada Amin
  • Benno Schwikowski
  • Trey Ideker
  • First Published November 3, 2003
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