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C. elegans balancer strains reveals previously unappreciated complex genomic rearrangements" > Genome sequencing of C. elegans balancer strains reveals previously unappreciated complex genomic rearrangements

  • Tatiana Maroilley
  • Stephane Flibotte
  • Francesca Jean
  • Victoria Rodrigues Alves Barbosa
  • Andrew Galbraith
  • Afiya Razia Chida Filip Cotra Xiao Li
  • ... [+3 authors] ...,
  • Larisa Oncea
  • Mark Edgley
  • Don Moerman
  • Maja Tarailo-Graovac
  • First Published December 5, 2022
Resource

Burkholderia cenocepacia during long-term chronic infection of cystic fibrosis lungs" > Phenotypic diversity and genotypic flexibility of Burkholderia cenocepacia during long-term chronic infection of cystic fibrosis lungs

  • Amy Huei-Yi Lee
  • Stephane Flibotte
  • Sunita Sinha
  • Adrianna Paiero
  • Rachel L. Ehrlich
  • Sergey Balashov
  • ... [+1 authors] ...,
  • Garth D. Ehrlich
  • James E.A. Zlosnik
  • Joshua Chang Mell
  • Corey Nislow
  • First Published March 21, 2017
Research

SCRaMbLE generates designed combinatorial stochastic diversity in synthetic chromosomes

  • Yue Shen
  • Giovanni Stracquadanio
  • Yun Wang
  • Kun Yang
  • Leslie A. Mitchell
  • Yaxin Xue Yizhi Cai Tai Chen Jessica S. Dymond Kang Kang Jianhui Gong Xiaofan Zeng Yongfen Zhang Yingrui Li Qiang Feng Xun Xu Jun Wang
  • ... [+12 authors] ...,
  • Jian Wang
  • Huanming Yang
  • Jef D. Boeke
  • Joel S. Bader
  • First Published November 13, 2015
Resource

Caenorhabditis elegans" > The million mutation project: A new approach to genetics in Caenorhabditis elegans

  • Owen Thompson
  • Mark Edgley
  • Pnina Strasbourger
  • Stephane Flibotte
  • Brent Ewing
  • Ryan Adair Vinci Au Iasha Chaudhry Lisa Fernando Harald Hutter Armelle Kieffer Joanne Lau Norris Lee Angela Miller Greta Raymant Bin Shen Jay Shendure Jon Taylor
  • ... [+13 authors] ...,
  • Emily H. Turner
  • LaDeana W. Hillier
  • Donald G. Moerman
  • Robert H. Waterston
  • First Published June 25, 2013
Research

Whole-genome sequencing identifies recurrent mutations in hepatocellular carcinoma

  • Zhengyan Kan
  • Hancheng Zheng
  • Xiao Liu
  • Shuyu Li
  • Thomas D. Barber
  • Zhuolin Gong Huan Gao Ke Hao Melinda D. Willard Jiangchun Xu Robert Hauptschein Paul A. Rejto Julio Fernandez Guan Wang Qinghui Zhang Bo Wang Ronghua Chen Jian Wang Nikki P. Lee Wei Zhou Zhao Lin Zhiyu Peng Kang Yi Shengpei Chen Lin Li Xiaomei Fan Jie Yang Rui Ye Jia Ju Kai Wang Heather Estrella Shibing Deng Ping Wei Ming Qiu Isabella H. Wulur Jiangang Liu Mariam E. Ehsani Chunsheng Zhang Andrey Loboda Wing Kin Sung Amit Aggarwal Ronnie T. Poon Sheung Tat Fan Jun Wang James Hardwick Christoph Reinhard
  • ... [+41 authors] ...,
  • Hongyue Dai
  • Yingrui Li
  • John M. Luk
  • Mao Mao
  • First Published June 20, 2013
Resource

SOAPindel: Efficient identification of indels from short paired reads

  • Shengting Li
  • Ruiqiang Li
  • Heng Li
  • Jianliang Lu
  • Yingrui Li
  • Lars Bolund
  • Mikkel H. Schierup
  • Jun Wang
  • First Published September 12, 2012
Resource

Assemblathon 1: A competitive assessment of de novo short read assembly methods

  • Dent Earl
  • Keith Bradnam
  • John St. John
  • Aaron Darling
  • Dawei Lin
  • Joseph Fass Hung On Ken Yu Vince Buffalo Daniel R. Zerbino Mark Diekhans Ngan Nguyen Pramila Nuwantha Ariyaratne Wing-Kin Sung Zemin Ning Matthias Haimel Jared T. Simpson Nuno A. Fonseca İnanç Birol T. Roderick Docking Isaac Y. Ho Daniel S. Rokhsar Rayan Chikhi Dominique Lavenier Guillaume Chapuis Delphine Naquin Nicolas Maillet Michael C. Schatz David R. Kelley Adam M. Phillippy Sergey Koren Shiaw-Pyng Yang Wei Wu Wen-Chi Chou Anuj Srivastava Timothy I. Shaw J. Graham Ruby Peter Skewes-Cox Miguel Betegon Michelle T. Dimon Victor Solovyev Igor Seledtsov Petr Kosarev Denis Vorobyev Ricardo Ramirez-Gonzalez Richard Leggett Dan MacLean Fangfang Xia Ruibang Luo Zhenyu Li Yinlong Xie Binghang Liu Sante Gnerre Iain MacCallum Dariusz Przybylski Filipe J. Ribeiro Shuangye Yin Ted Sharpe Giles Hall Paul J. Kersey Richard Durbin Shaun D. Jackman Jarrod A. Chapman Xiaoqiu Huang Joseph L. DeRisi Mario Caccamo Yingrui Li David B. Jaffe
  • ... [+62 authors] ...,
  • Richard E. Green
  • David Haussler
  • Ian Korf
  • Benedict Paten
  • First Published September 16, 2011
Resource

De novo assembly of human genomes with massively parallel short read sequencing

  • Ruiqiang Li
  • Hongmei Zhu
  • Jue Ruan
  • Wubin Qian
  • Xiaodong Fang
  • Zhongbin Shi Yingrui Li Shengting Li Gao Shan Karsten Kristiansen
  • ... [+5 authors] ...,
  • Songgang Li
  • Huanming Yang
  • Jian Wang
  • Jun Wang
  • First Published December 17, 2009
Resource

SNP detection for massively parallel whole-genome resequencing

  • Ruiqiang Li
  • Yingrui Li
  • Xiaodong Fang
  • Huanming Yang
  • Jian Wang
  • Karsten Kristiansen
  • Jun Wang
  • First Published May 6, 2009
LETTER

Escherichia coli" > Transcription of foreign DNA in Escherichia coli

  • René L. Warren
  • John D. Freeman
  • Roger C. Levesque
  • Duane E. Smailus
  • Stephane Flibotte
  • Robert A. Holt
  • First Published August 13, 2008
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