Search | Genome Research

Method

Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs

Michiel de Hoon
Alessandro Bonetti
Charles Plessy
Yoshinari Ando
Chung-Chau Hon
Yuri Ishizu Masayoshi Itoh Sachi Kato Dongyan Lin Sho Maekawa Mitsuyoshi Murata Hiromi Nishiyori Jay W. Shin Jens Stolte Ana Maria Suzuki Michihira Tagami Hazuki Takahashi Supat Thongjuea
... [+13 authors] ...,
Alistair R.R. Forrest
Yoshihide Hayashizaki
Juha Kere
Piero Carninci

First Published August 12, 2022

Research

Comparative transcriptomics of primary cells in vertebrates

Tanvir Alam
Saumya Agrawal
Jessica Severin
Robert S. Young
Robin Andersson
Erik Arner Akira Hasegawa Marina Lizio Jordan A. Ramilowski Imad Abugessaisa Yuri Ishizu Shohei Noma Hiroshi Tarui Martin S. Taylor Timo Lassmann Masayoshi Itoh Takeya Kasukawa Hideya Kawaji Luigi Marchionni Guojun Sheng Alistair R.R. Forrest
... [+16 authors] ...,
Levon M. Khachigian
Yoshihide Hayashizaki
Piero Carninci
Michiel J.L. de Hoon

First Published July 27, 2020

Corrigendum

Corrigendum: A comparative analysis of whole genome sequencing of esophageal adenocarcinoma pre- and post-chemotherapy

Ayesha Noorani
Jan Bornschein
Andy G. Lynch
Maria Secrier
Achilleas Achilleos
Matthew Eldridge Lawrence Bower Jamie M.J. Weaver Jason Crawte Chin-Ann Ong Nicholas Shannon Shona MacRae Nicola Grehan Barbara Nutzinger
... [+9 authors] ...,
Maria O'Donovan
Richard Hardwick
Simon Tavaré
Rebecca C. Fitzgerald

First Published October 3, 2017

Research

A comparative analysis of whole genome sequencing of esophageal adenocarcinoma pre- and post-chemotherapy

Ayesha Noorani
Jan Bornschein
Andy G. Lynch
Maria Secrier
Achilleas Achilleos
Matthew Eldridge Lawrence Bower Jamie M.J. Weaver Jason Crawte Chin-Ann Ong Nicholas Shannon Shona MacRae Nicola Grehan Barbara Nutzinger Maria O'Donovan Richard Hardwick Simon Tavaré Rebecca C. Fitzgerald Rachael Fels Elliott Paul A.W. Edwards Xiaodun Li Hamza Chettouh Gianmarco Contini Eleanor Gregson Sebastian Zeki Laura Smith Zarah Abdullahi Rachel de la Rue Ahmad Miremadi Shalini Malhotra Mike L. Smith Jim Davies Charles Crichton Nick Carroll Peter Safranek Andrew Hindmarsh Vijayendran Sujendran Richard Turkington Stephen J. Hayes Yeng Ang Shaun R. Preston Sarah Oakes Izhar Bagwan Vicki Save Richard J.E. Skipworth Ted R. Hupp J. Robert O'Neill Olga Tucker Andrew Beggs Philippe Taniere Sonia Puig Timothy J. Underwood Fergus Noble Jack Owsley Hugh Barr Neil Shepherd Oliver Old Jesper Lagergren James Gossage Andrew Davies Fuju Chang Janine Zylstra Grant Sanders Richard Berrisford Catherine Harden David Bunting Mike Lewis Ed Cheong Bhaskar Kumar Simon L. Parsons John Saunders Irshad Soomro Philip Kaye Laurence Lovat Rehan Haidry Victor Eneh Laszlo Igali Ian M. Welch Michael Scott Shamila Sothi Sari Suortamo Suzy Lishman Anna Grabowska
... [+78 authors] ...,
Christopher J. Peters
George B. Hanna
David Khoo
Duncan Beardsmore

First Published May 2, 2017

Research

The frequent evolutionary birth and death of functional promoters in mouse and human

Robert S. Young
Yoshihide Hayashizaki
Robin Andersson
Albin Sandelin
Hideya Kawaji
Masayoshi Itoh Timo Lassmann
... [+2 authors] ...,
Piero Carninci
Wendy A. Bickmore
Alistair R. Forrest
Martin S. Taylor

First Published July 30, 2015

Method

Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing

Hideya Kawaji
Marina Lizio
Masayoshi Itoh
Mutsumi Kanamori-Katayama
Ai Kaiho
Hiromi Nishiyori-Sueki Jay W. Shin Miki Kojima-Ishiyama Mitsuoki Kawano Mitsuyoshi Murata Noriko Ninomiya-Fukuda Sachi Ishikawa-Kato Sayaka Nagao-Sato
... [+8 authors] ...,
Shohei Noma
Yoshihide Hayashizaki
Alistair R.R. Forrest
Piero Carninci

First Published March 27, 2014

Research

Promoter architecture of mouse olfactory receptor genes

Charles Plessy
Giovanni Pascarella
Nicolas Bertin
Altuna Akalin
Claudia Carrieri
Anne Vassalli Dejan Lazarevic Jessica Severin Christina Vlachouli Roberto Simone Geoffrey J. Faulkner Jun Kawai Carsten O. Daub Silvia Zucchelli Yoshihide Hayashizaki
... [+10 authors] ...,
Peter Mombaerts
Boris Lenhard
Stefano Gustincich
Piero Carninci

First Published December 22, 2011

Research

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

Weisheng Wu
Yong Cheng
Cheryl A. Keller
Jason Ernst
Swathi Ashok Kumar
Tejaswini Mishra Christapher Morrissey Christine M. Dorman Kuan-Bei Chen Daniela Drautz Belinda Giardine Yoichiro Shibata Lingyun Song Max Pimkin Gregory E. Crawford Terrence S. Furey Manolis Kellis Webb Miller James Taylor Stephan C. Schuster Yu Zhang
... [+16 authors] ...,
Francesca Chiaromonte
Gerd A. Blobel
Mitchell J. Weiss
Ross C. Hardison

First Published July 27, 2011

Method

Genome-wide identification of conserved regulatory function in diverged sequences

Leila Taher
David M. McGaughey
Samantha Maragh
Ivy Aneas
Seneca L. Bessling
Webb Miller
Marcelo A. Nobrega
Andrew S. McCallion
Ivan Ovcharenko

First Published May 31, 2011

Method

Unamplified cap analysis of gene expression on a single-molecule sequencer

Mutsumi Kanamori-Katayama
Masayoshi Itoh
Hideya Kawaji
Timo Lassmann
Shintaro Katayama
Miki Kojima Nicolas Bertin Ai Kaiho Noriko Ninomiya
... [+4 authors] ...,
Carsten O. Daub
Piero Carninci
Alistair R.R. Forrest
Yoshihide Hayashizaki

First Published May 19, 2011

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Your search for returned 80 results

Method

Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs

Research

Comparative transcriptomics of primary cells in vertebrates

Corrigendum

Corrigendum: A comparative analysis of whole genome sequencing of esophageal adenocarcinoma pre- and post-chemotherapy

Research

A comparative analysis of whole genome sequencing of esophageal adenocarcinoma pre- and post-chemotherapy

Research

The frequent evolutionary birth and death of functional promoters in mouse and human

Method

Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing

Research

Promoter architecture of mouse olfactory receptor genes

Research

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

Method

Genome-wide identification of conserved regulatory function in diverged sequences

Method

Unamplified cap analysis of gene expression on a single-molecule sequencer

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