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Method

Single-cell transcriptome analysis reveals onco-fetal reprogramming with implications for drug resistance and clinical outcome

  • First Published October 9, 2026
Method

Seamless, rapid, and accurate analyses of outbreak genomic data using split k-mer analysis

  • First Published October 15, 2024
Resource

Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes

  • First Published July 1, 2024
Method

Domain-adaptive neural networks improve cross-species prediction of transcription factor binding

  • First Published January 18, 2022
Resource

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

  • First Published March 4, 2020
Resource

A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection

  • First Published October 24, 2019
Method

Fast and flexible bacterial genomic epidemiology with PopPUNK

  • First Published January 24, 2019
Method

HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient

  • First Published August 30, 2017
Research

Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131

  • First Published July 18, 2017
Research

Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion

  • First Published June 6, 2017
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