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Research

Genetic control of the dynamic transcriptional response to immune stimuli and glucocorticoids at single-cell resolution

Justyna A. Resztak
Julong Wei
Samuele Zilioli
Edward Sendler
Adnan Alazizi
Henriette E. Mair-Meijers Peijun Wu Xiaoquan Wen
... [+3 authors] ...,
Richard B. Slatcher
Xiang Zhou
Francesca Luca
Roger Pique-Regi

First Published July 13, 2023

Method

High-throughput characterization of genetic effects on DNA–protein binding and gene transcription

Cynthia A. Kalita
Christopher D. Brown
Andrew Freiman
Jenna Isherwood
Xiaoquan Wen
Roger Pique-Regi
Francesca Luca

First Published September 25, 2018

Research

High-throughput allele-specific expression across 250 environmental conditions

Gregory A. Moyerbrailean
Allison L. Richards
Daniel Kurtz
Cynthia A. Kalita
Gordon O. Davis
Chris T. Harvey Adnan Alazizi Donovan Watza Yoram Sorokin Nancy Hauff
... [+5 authors] ...,
Xiang Zhou
Xiaoquan Wen
Roger Pique-Regi
Francesca Luca

First Published October 19, 2016

Research

Bacterial infection remodels the DNA methylation landscape of human dendritic cells

Alain Pacis
Ludovic Tailleux
Alexander M. Morin
John Lambourne
Julia L. MacIsaac
Vania Yotova Anne Dumaine Anne Danckaert Francesca Luca Jean-Christophe Grenier Kasper D. Hansen Brigitte Gicquel Miao Yu Athma Pai Chuan He Jenny Tung Tomi Pastinen
... [+12 authors] ...,
Michael S. Kobor
Roger Pique-Regi
Yoav Gilad
Luis B. Barreiro

First Published September 21, 2015

Method

Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data

Roger Pique-Regi
Jacob F. Degner
Athma A. Pai
Daniel J. Gaffney
Yoav Gilad
Jonathan K. Pritchard

First Published November 24, 2010