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Resource

The PanOryza pangene catalog of Asian cultivated rice

  • Bruno Contreras-Moreira
  • Eshan Sharma
  • Shradha Saraf
  • Guy Naamati
  • Parul Gupta
  • Justin Elser Dmytro Chebotarov Kapeel Chougule Zhenyuan Lu Sharon Wei Andrew Olson Ian Tsang Disha Lodha Yong Zhou Zhichao Yu Wen Zhao Jianwei Zhang Sandeep Amberkar Kawinnat Sue-Ob Zhi Sun Maria Martin Kenneth L. McNally Doreen Ware Eric W. Deutsch Dario Copetti
  • ... [+20 authors] ...,
  • Rod A. Wing
  • Pankaj Jaiswal
  • Sarah Dyer
  • Andrew R. Jones
  • First Published December 12, 2025
Research

Oryza" > Continuous infiltration and evolutionary trajectory of nuclear organelle DNA in Oryza

  • Chenbo Gong
  • Yicheng Huang
  • Mengmeng Liu
  • Yong Zhou
  • Yinwei Xu
  • Nahed Mohammed Xintong Qiao Andrea Zuccolo Weibo Xie
  • ... [+4 authors] ...,
  • Rod A. Wing
  • Jianwei Zhang
  • Fei Zhou
  • Yongjun Lin
  • First Published April 25, 2025
Research

Selfish mutations dysregulating RAS-MAPK signaling are pervasive in aged human testes

  • Geoffrey J. Maher
  • Hannah K. Ralph
  • Zhihao Ding
  • Nils Koelling
  • Hana Mlcochova
  • Eleni Giannoulatou Pawan Dhami Dirk S. Paul Stefan H. Stricker
  • ... [+4 authors] ...,
  • Stephan Beck
  • Gilean McVean
  • Andrew O.M. Wilkie
  • Anne Goriely
  • First Published October 24, 2018
Research

A functional methylome map of ulcerative colitis

  • Robert Häsler
  • Zhe Feng
  • Liselotte Bäckdahl
  • Martina E. Spehlmann
  • Andre Franke
  • Andrew Teschendorff Vardhman K. Rakyan Thomas A. Down Gareth A. Wilson
  • ... [+4 authors] ...,
  • Andrew Feber
  • Stephan Beck
  • Stefan Schreiber
  • Philip Rosenstiel
  • First Published July 23, 2012
Research

Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors

  • Andrew Feber
  • Gareth A. Wilson
  • Lu Zhang
  • Nadege Presneau
  • Bernadine Idowu
  • Thomas A. Down Vardhman K. Rakyan Luke A. Noon Alison C. Lloyd Elia Stupka Vassia Schiza
  • ... [+6 authors] ...,
  • Andrew E. Teschendorff
  • Gary P. Schroth
  • Adrienne Flanagan
  • Stephan Beck
  • First Published February 1, 2011
Research

Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer

  • Andrew E. Teschendorff
  • Usha Menon
  • Aleksandra Gentry-Maharaj
  • Susan J. Ramus
  • Daniel J. Weisenberger
  • Hui Shen Mihaela Campan Houtan Noushmehr Christopher G. Bell A. Peter Maxwell David A. Savage Elisabeth Mueller-Holzner Christian Marth Gabrijela Kocjan Simon A. Gayther Allison Jones Stephan Beck
  • ... [+12 authors] ...,
  • Wolfgang Wagner
  • Peter W. Laird
  • Ian J. Jacobs
  • Martin Widschwendter
  • First Published March 10, 2010
LETTER

Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex

  • Diego Ottaviani
  • Elliott Lever
  • Richard Mitter
  • Tania Jones
  • Tim Forshew
  • Rossitza Christova Eleni M. Tomazou Vardhman K. Rakyan Stephen A. Krawetz
  • ... [+4 authors] ...,
  • Adrian E. Platts
  • Badmavady Segarane
  • Stephan Beck
  • Denise Sheer
  • First Published October 10, 2008
RESOURCE

An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)

  • Vardhman K. Rakyan
  • Thomas A. Down
  • Natalie P. Thorne
  • Paul Flicek
  • Eugene Kulesha
  • Stefan Gräf Eleni M. Tomazou Liselotte Bäckdahl Nathan Johnson Marlis Herberth Kevin L. Howe David K. Jackson Marcos M. Miretti Heike Fiegler John C. Marioni Ewan Birney
  • ... [+11 authors] ...,
  • Tim J.P. Hubbard
  • Nigel P. Carter
  • Simon Tavaré
  • Stephan Beck
  • First Published June 24, 2008
LETTER

Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana" > Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana

  • Takeshi Itoh
  • Tsuyoshi Tanaka
  • Roberto A. Barrero
  • Chisato Yamasaki
  • Yasuyuki Fujii
  • Phillip B. Hilton Baltazar A. Antonio Hideo Aono Rolf Apweiler Richard Bruskiewich Thomas Bureau Frances Burr Antonio Costa de Oliveira Galina Fuks Takuya Habara Georg Haberer Bin Han Erimi Harada Aiko T. Hiraki Hirohiko Hirochika Douglas Hoen Hiroki Hokari Satomi Hosokawa Yue Hsing Hiroshi Ikawa Kazuho Ikeo Tadashi Imanishi Yukiyo Ito Pankaj Jaiswal Masako Kanno Yoshihiro Kawahara Toshiyuki Kawamura Hiroaki Kawashima Jitendra P. Khurana Shoshi Kikuchi Setsuko Komatsu Kanako O. Koyanagi Hiromi Kubooka Damien Lieberherr Yao-Cheng Lin David Lonsdale Takashi Matsumoto Akihiro Matsuya W. Richard McCombie Joachim Messing Akio Miyao Nicola Mulder Yoshiaki Nagamura Jongmin Nam Nobukazu Namiki Hisataka Numa Shin Nurimoto Claire O’Donovan Hajime Ohyanagi Toshihisa Okido Satoshi OOta Naoki Osato Lance E. Palmer Francis Quetier Saurabh Raghuvanshi Naomi Saichi Hiroaki Sakai Yasumichi Sakai Katsumi Sakata Tetsuya Sakurai Fumihiko Sato Yoshiharu Sato Heiko Schoof Motoaki Seki Michie Shibata Yuji Shimizu Kazuo Shinozaki Yuji Shinso Nagendra K. Singh Brian Smith-White Jun-ichi Takeda Motohiko Tanino Tatiana Tatusova Supat Thongjuea Fusano Todokoro Mika Tsugane Akhilesh K. Tyagi Apichart Vanavichit Aihui Wang Rod A. Wing Kaori Yamaguchi Mayu Yamamoto Naoyuki Yamamoto Yeisoo Yu Hao Zhang Qiang Zhao
  • ... [+86 authors] ...,
  • Kenichi Higo
  • Benjamin Burr
  • Takashi Gojobori
  • Takuji Sasaki
  • First Published January 8, 2007
LETTER

Oryza australiensis, a wild relative of rice" > Doubling genome size without polyploidization: Dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

  • Benoit Piegu
  • Romain Guyot
  • Nathalie Picault
  • Anne Roulin
  • Abhijit Saniyal
  • Hyeran Kim Kristi Collura
  • ... [+2 authors] ...,
  • Darshan S. Brar
  • Scott Jackson
  • Rod A. Wing
  • Olivier Panaud
  • First Published September 8, 2006
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