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Research

Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages

  • First Published November 18, 2020
Research

ATAC-seq reveals regional differences in enhancer accessibility during the establishment of spatial coordinates in the Drosophila blastoderm

  • First Published April 8, 2019
Corrigendum

Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data

  • First Published January 2, 2018
Corrigendum

Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

  • First Published September 1, 2017
Resource

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

  • First Published April 10, 2017
Research

Discovery and genotyping of structural variation from long-read haploid genome sequence data

  • First Published November 28, 2016
Research

Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region

  • First Published October 7, 2016
Research

Pangolin genomes and the evolution of mammalian scales and immunity

  • First Published August 10, 2016
Method

INTEGRATE: gene fusion discovery using whole genome and transcriptome data

  • First Published November 10, 2015
Resource

Single haplotype assembly of the human genome from a hydatidiform mole

  • First Published November 4, 2014
Resource

Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline

  • First Published March 27, 2014
Method

Reconstructing complex regions of genomes using long-read sequencing technology

  • First Published January 13, 2014
Resource

MuSiC: Identifying mutational significance in cancer genomes

  • First Published July 3, 2012
Research

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

  • First Published March 14, 2012
Research

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

  • First Published June 17, 2011
LETTER

Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites

  • First Published November 24, 2008
RESOURCE

Haplotype sorting using human fosmid clone end-sequence pairs

  • First Published October 3, 2008
ARTICLE

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • First Published June 13, 2007
RESOURCE

PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data

  • First Published April 6, 2007
RESOURCE

Molecular refinement of gibbon genome rearrangements

  • First Published December 21, 2006
Methods

Physical map-assisted whole-genome shotgun sequence assemblies

  • First Published June 1, 2006
ARTICLE

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

  • First Published July 15, 2005
LETTER

Punctuated duplication seeding events during the evolution of human chromosome 2p11

  • First Published June 17, 2005
LETTER

Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana

  • First Published April 1, 2005
RESOURCE

EAnnot: A genome annotation tool using experimental evidence

  • First Published December 1, 2004
LETTER

Analysis of Human mRNAs With the Reference Genome Sequence Reveals Potential Errors, Polymorphisms, and RNA Editing

  • First Published October 15, 2004
Chicken Special/Letters

The repetitive landscape of the chicken genome

  • First Published July 15, 2004
INSIGHT/OUTLOOK

What is Finished, and Why Does it Matter

  • First Published May 1, 2002
METHODS

Theories and Applications for Sequencing Randomly Selected Clones

  • First Published January 18, 2001
LETTER

A Pneumatic Device for Rapid Loading of DNA Sequencing Gels

  • First Published May 1, 1998
LETTER

High Throughput Fingerprint Analysis of Large-Insert Clones

  • First Published November 1, 1997
GENOME METHODS

A Transposon-Based Strategy for Sequencing Repetitive DNA in Eukaryotic Genomes

  • First Published May 1, 1997
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