Research
Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages" > Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages
- First Published November 18, 2020
Research
ZFX acts as a transcriptional activator in multiple types of human tumors by binding downstream from transcription start sites at the majority of CpG island promoters
- First Published February 2, 2018
Corrigendum
Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data
- First Published January 2, 2018
Corrigendum
Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2
- First Published September 1, 2017
Resource
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
- First Published April 10, 2017
Research
Discovery and genotyping of structural variation from long-read haploid genome sequence data
- First Published November 28, 2016
Research
Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region
- First Published October 7, 2016
Research
Pangolin genomes and the evolution of mammalian scales and immunity
- First Published August 10, 2016
Method
INTEGRATE: gene fusion discovery using whole genome and transcriptome data
- First Published November 10, 2015
Resource
Chlorocebus aethiops sabaeus)" > The genome of the vervet (Chlorocebus aethiops sabaeus)
- First Published September 16, 2015
Research
The role of DNA methylation in directing the functional organization of the cancer epigenome
- First Published March 6, 2015
Resource
Single haplotype assembly of the human genome from a hydatidiform mole
- First Published November 4, 2014
Resource
Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline
- First Published March 27, 2014
Method
Reconstructing complex regions of genomes using long-read sequencing technology
- First Published January 13, 2014
Method
Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm
- First Published June 26, 2013
Method
Spark: A navigational paradigm for genomic data exploration
- First Published September 7, 2012
Resource
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
- First Published September 5, 2012
Research
The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2
- First Published March 14, 2012
Resource
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- First Published February 2, 2012
Research
Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee
- First Published June 17, 2011
LETTER
Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites
- First Published November 24, 2008
RESOURCE
Haplotype sorting using human fosmid clone end-sequence pairs
- First Published October 3, 2008
LETTER
E2F in vivo binding specificity: Comparison of consensus versus nonconsensus binding sites
- First Published October 3, 2008
LETTER
Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells
- First Published March 17, 2008
LETTER
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
- First Published February 7, 2008
ARTICLE
A comprehensive ChIP–chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals interchangeable roles of E2F family members
- First Published October 1, 2007
ARTICLE
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
- First Published June 13, 2007
LETTER
Identification of an OCT4 and SRY regulatory module using integrated computational and experimental genomics approaches
- First Published June 13, 2007
RESOURCE
PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data
- First Published April 6, 2007
REVIEW
Locating mammalian transcription factor binding sites: A survey of computational and experimental techniques
- First Published October 19, 2006
LETTER
Suz12 binds to silenced regions of the genome in a cell-type-specific manner
- First Published June 2, 2006
LETTER
Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome
- First Published April 10, 2006
ARTICLE
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
- First Published July 15, 2005
LETTER
Punctuated duplication seeding events during the evolution of human chromosome 2p11
- First Published June 17, 2005
LETTER
Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana" > Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana
- First Published April 1, 2005
RESOURCE
EAnnot: A genome annotation tool using experimental evidence
- First Published December 1, 2004
LETTER
Analysis of Human mRNAs With the Reference Genome Sequence Reveals Potential Errors, Polymorphisms, and RNA Editing
- First Published October 15, 2004
Chicken Special/Letters
The repetitive landscape of the chicken genome
- First Published July 15, 2004
METHODS
Theories and Applications for Sequencing Randomly Selected Clones
- First Published January 18, 2001
GENOME METHODS
A Transposon-Based Strategy for Sequencing Repetitive DNA in Eukaryotic Genomes
- First Published May 1, 1997