Research
Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages" > Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages
- First Published November 18, 2020
Research
ZFX acts as a transcriptional activator in multiple types of human tumors by binding downstream from transcription start sites at the majority of CpG island promoters
- First Published February 2, 2018
Research
Macaca mulatta) based on whole-genome sequences" > The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences
- First Published October 17, 2016
Research
Postmortem genetic screening for the identification, verification, and reporting of genetic variants contributing to the sudden death of the young
- First Published July 19, 2016
Insight/Outlook
The ethics of conducting molecular autopsies in cases of sudden death in the young
- First Published July 13, 2016
Research
Exonuclease mutations in DNA polymerase epsilon reveal replication strand specific mutation patterns and human origins of replication
- First Published September 16, 2014
Resource
D. melanogaster modENCODE transcriptome annotation" > Comparative validation of the D. melanogaster modENCODE transcriptome annotation
- First Published July 1, 2014
Method
Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm
- First Published June 26, 2013
Method
An integrative variant analysis pipeline for accurate genotype/haplotype inference in population NGS data
- First Published January 7, 2013
Resource
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
- First Published September 5, 2012
Resource
A SNP discovery method to assess variant allele probability from next-generation resequencing data
- First Published December 17, 2009
LETTER
A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome
- First Published December 3, 2008
LETTER
E2F in vivo binding specificity: Comparison of consensus versus nonconsensus binding sites
- First Published October 3, 2008
LETTER
Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells
- First Published March 17, 2008
LETTER
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
- First Published February 7, 2008
RESOURCE
28-Way vertebrate alignment and conservation track in the UCSC Genome Browser
- First Published November 5, 2007
ARTICLE
A comprehensive ChIP–chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals interchangeable roles of E2F family members
- First Published October 1, 2007
LETTER
Identification of an OCT4 and SRY regulatory module using integrated computational and experimental genomics approaches
- First Published June 13, 2007
ARTICLE
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome
- First Published June 13, 2007
COMMENTARY
Community annotation: Procedures, protocols, and supporting tools
- First Published October 25, 2006
LETTER
Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects
- First Published October 25, 2006
REVIEW
Locating mammalian transcription factor binding sites: A survey of computational and experimental techniques
- First Published October 19, 2006
LETTER
Suz12 binds to silenced regions of the genome in a cell-type-specific manner
- First Published June 2, 2006
LETTER
Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome
- First Published April 10, 2006
ARTICLE
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
- First Published July 15, 2005
Methods
Highly multiplexed molecular inversion probe genotyping: Over 10,000 targeted SNPs genotyped in a single tube assay
- First Published February 1, 2005
LETTER
Genomic Analysis of the Nuclear Receptor Family: New Insights Into Structure, Regulation, and Evolution From the Rat Genome
- First Published April 1, 2004
Methods
Dynamic Building of a BAC Clone Tiling Path for the Rat Genome Sequencing Project
- First Published April 1, 2004
Methods
Identification of Rat Genes by TWINSCAN Gene Prediction, RT–PCR, and Direct Sequencing
- First Published April 1, 2004
LETTER
Comparing Vertebrate Whole-Genome Shotgun Reads to the Human Genome
- First Published November 1, 2001
PERSPECTIVE
A Clone-Array Pooled Shotgun Strategy for Sequencing Large Genomes
- First Published October 1, 2001
GENOME METHODS
Analysis of the Quality and Utility of Random Shotgun Sequencing at Low Redundancies
- First Published October 1, 1998
RESEARCH
Comparative Sequence Analysis of a Gene-Rich Cluster at Human Chromosome 12p13 and its Syntenic Region in Mouse Chromosome 6
- First Published January 1, 1998
RESEARCH
Large-Scale Comparative Sequence Analysis of the Human and Murine Bruton’s Tyrosine Kinase Loci Reveals Conserved Regulatory Domains
- First Published April 1, 1997